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Protein

Uncharacterized protein At4g06744

Gene

At4g06744

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein At4g06744
Gene namesi
Ordered Locus Names:At4g06744
ORF Names:F15N16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G06744.
TAIRilocus:1005716458. AT4G06744.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_000030594417 – 404Uncharacterized protein At4g06744Add BLAST388

Proteomic databases

PaxDbiQ8W3M4.
PRIDEiQ8W3M4.

Expressioni

Gene expression databases

ExpressionAtlasiQ8W3M4. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G06744.1.

Structurei

3D structure databases

ProteinModelPortaliQ8W3M4.
SMRiQ8W3M4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati117 – 141LRR 1Add BLAST25
Repeati142 – 165LRR 2Add BLAST24
Repeati167 – 188LRR 3Add BLAST22
Repeati189 – 212LRR 4Add BLAST24
Repeati214 – 237LRR 5Add BLAST24
Repeati239 – 262LRR 6Add BLAST24
Repeati263 – 286LRR 7Add BLAST24
Repeati287 – 310LRR 8Add BLAST24
Repeati312 – 338LRR 9Add BLAST27
Repeati340 – 359LRR 10Add BLAST20

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal

Phylogenomic databases

eggNOGiENOG410IVBA. Eukaryota.
ENOG410YFAF. LUCA.
HOGENOMiHOG000239260.
InParanoidiQ8W3M4.
OMAiFINDNGF.
OrthoDBiEOG09360CRN.
PhylomeDBiQ8W3M4.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiView protein in InterPro
IPR032675. LRR_dom_sf.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8W3M4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNHLLLALF LVGTIALPDR GTQQLTNDGL TGARREILSF LDQRLAVVYP
60 70 80 90 100
VIQRFKSLIT LDPYNVTKTW IGSDICSYRG FHCDNPPHNK TAVTVASIDF
110 120 130 140 150
NGFQLSAPSI EGFIDQFADL ALFHVNSNNF GGTVPSKIVN LRYLYELDIS
160 170 180 190 200
NNRFTGQFPT AVVGMSGLTF IDIRFNSFSG SIPPQILGQN LEVLFINDNG
210 220 230 240 250
FTASLPEIPG DGTTHILFLT LANNKFNGPL PRSILRSMST LTEVLFLNND
260 270 280 290 300
FTGCIPHEIG FLTGASVIDI GGNKLTGPLP LSLMCLEKVE QLNFAGNLLF
310 320 330 340 350
GAVPEAVCML LRDNLVNLSL SDNYFTHVGP WCRGLLEKGV LDVGNNCIPF
360 370 380 390 400
FPGQRSMQEC AEFFVKPKKY YCPHMWFHSF FSCRYSHISS SSSSAFMPMV

APSP
Length:404
Mass (Da):44,619
Last modified:March 1, 2002 - v1
Checksum:i89E68E1570AFF188
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB073166 Genomic DNA. Translation: BAB83614.1.
CP002687 Genomic DNA. Translation: AEE82560.1.
RefSeqiNP_849339.1. NM_179008.2.
UniGeneiAt.47251.

Genome annotation databases

EnsemblPlantsiAT4G06744.1; AT4G06744.1; AT4G06744.
GeneIDi826147.
GrameneiAT4G06744.1; AT4G06744.1; AT4G06744.
KEGGiath:AT4G06744.

Similar proteinsi

Entry informationi

Entry nameiY4744_ARATH
AccessioniPrimary (citable) accession number: Q8W3M4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 2, 2007
Last sequence update: March 1, 2002
Last modified: February 28, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome