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Q8W245 (ZIP10_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified September 21, 2011. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable zinc transporter 10
Alternative name(s):
ZRT/IRT-like protein 10
Gene names
Name:ZIP10
Ordered Locus Names:At1g31260
ORF Names:T19E23.6
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Probably mediates zinc uptake from the rhizosphere By similarity.

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the ZIP transporter (TC 2.A.5) family. [View classification]

Sequence caution

The sequence AAL38436.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Biological processIon transport
Transport
Zinc transport
   Cellular componentCell membrane
Membrane
   DomainSignal
Transmembrane
Transmembrane helix
   LigandZinc
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionzinc ion transmembrane transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential
Chain29 – 364336Probable zinc transporter 10
PRO_0000041647

Regions

Topological domain29 – 5224Extracellular Potential
Transmembrane53 – 7321Helical; Potential
Topological domain74 – 8512Cytoplasmic Potential
Transmembrane86 – 10621Helical; Potential
Topological domain107 – 12519Extracellular Potential
Transmembrane126 – 14621Helical; Potential
Topological domain147 – 20963Cytoplasmic Potential
Transmembrane210 – 23021Helical; Potential
Topological domain231 – 24111Extracellular Potential
Transmembrane242 – 26221Helical; Potential
Topological domain263 – 2719Cytoplasmic Potential
Transmembrane272 – 29221Helical; Potential
Topological domain293 – 30311Extracellular Potential
Transmembrane304 – 32421Helical; Potential
Topological domain325 – 34319Cytoplasmic Potential
Transmembrane344 – 36421Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q8W245 [UniParc].

Last modified September 26, 2003. Version 2.
Checksum: 4747CFE90E6B92F2

FASTA36439,489
        10         20         30         40         50         60 
MTKSHVIFSA SIALFLLLSI SHFPGALSQS NKDCQSKSNY SCIDKNKALD LKLLSIFSIL 

        70         80         90        100        110        120 
ITSLIGVCLP FFARSIPAFQ PEKSHFLIVK SFASGIILST GFMHVLPDSF EMLSSPCLND 

       130        140        150        160        170        180 
NPWHKFPFAG FVAMMSAVFT LMVDSITTSV FTKSGRKDLR ADVASVETPD QEIGHVQVHG 

       190        200        210        220        230        240 
HVHSHTLPHN LHGENDKELG SYLQLLRYRI LAIVLELGIV VQSIVIGLSV GDTNNTCTIK 

       250        260        270        280        290        300 
GLVAALCFHQ MFEGMGLGGC ILQAEYGWVK KAVMAFFFAV TTPFGVVLGM ALSKTYKENS 

       310        320        330        340        350        360 
PESLITVGLL NASSAGLLIY MALVDLLAAD FMGQKMQRSI KLQLKSYAAV LLGAGGMSVM 


AKWA

« Hide

References

« Hide 'large scale' references
[1]"Phylogenetic relationships within cation transporter families of Arabidopsis."
Maeser P., Thomine S., Schroeder J.I., Ward J.M., Hirschi K., Sze H., Talke I.N., Amtmann A., Maathuis F.J.M., Sanders D., Harper J.F., Tchieu J., Gribskov M., Persans M.W., Salt D.E., Kim S.A., Guerinot M.L.
Plant Physiol. 126:1646-1667(2001) [PubMed: 11500563] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF369913 Genomic DNA. Translation: AAL38436.1. Sequence problems.
AC007654 Genomic DNA. Translation: AAF24597.1.
CP002684 Genomic DNA. Translation: AEE31333.1.
IPIIPI00526871.
RefSeqNP_174411.2. NM_102864.2.
UniGeneAt.51851.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

MINTMINT-3089551.
STRINGQ8W245.

Proteomic databases

PRIDEQ8W245.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G31260.1; AT1G31260.1; AT1G31260.
GeneID840014.
GenomeReviewsGene locus AT1G31260 in contig CT485782_GR.
KEGGath:AT1G31260.
NMPDRfig|3702.1.peg.3468.

Organism-specific databases

TAIRAt1g31260.

Phylogenomic databases

eggNOGKOG1558.
GeneTreeEPGT00050000005161.
HOGENOMHBG598807.
InParanoidQ8W245.
OMAENDKELG.
PhylomeDBQ8W245.
ProtClustDBCLSN2918488.

Gene expression databases

ArrayExpressQ8W245.
GenevestigatorQ8W245.
GermOnlineAT1G31260. Arabidopsis thaliana.

Family and domain databases

InterProIPR003689. ZIP.
IPR004698. Zn/Fe_permease_fun/pln.
[Graphical view]
PfamPF02535. Zip. 1 hit.
[Graphical view]
TIGRFAMsTIGR00820. Zip. 1 hit.
ProtoNetSearch...

Entry information

Entry nameZIP10_ARATH
AccessionPrimary (citable) accession number: Q8W245
Secondary accession number(s): Q9SHF4
Entry history
Integrated into UniProtKB/Swiss-Prot: September 26, 2003
Last sequence update: September 26, 2003
Last modified: September 21, 2011
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

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