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Protein

Aquaporin NIP1-1

Gene

NIP1-1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Water channel probably required to promote glycerol permeability and water transport across cell membranes.1 Publication

GO - Molecular functioni

  • arsenite transmembrane transporter activity Source: TAIR
  • water channel activity Source: TAIR

GO - Biological processi

  • arsenite transport Source: TAIR
  • regulation of defense response Source: TAIR
  • response to arsenic-containing substance Source: TAIR

Keywordsi

Biological processTransport

Protein family/group databases

TCDBi1.A.8.12.8. the major intrinsic protein (mip) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Aquaporin NIP1-1
Alternative name(s):
NOD26-like intrinsic protein 1-1
Short name:
AtNIP1;1
Nodulin-26-like major intrinsic protein 1
Short name:
NodLikeMip1
Short name:
Protein NLM1
Gene namesi
Name:NIP1-1
Synonyms:NLM1
Ordered Locus Names:At4g19030
ORF Names:F13C5.200
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G19030.
TAIRilocus:2117119. AT4G19030.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei57 – 77Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei84 – 104Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei136 – 156Helical; Name=3Sequence analysisAdd BLAST21
Transmembranei180 – 200Helical; Name=4Sequence analysisAdd BLAST21
Transmembranei205 – 225Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei249 – 269Helical; Name=6Sequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000640621 – 296Aquaporin NIP1-1Add BLAST296

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineBy similarity1
Modified residuei286PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ8VZW1.

Expressioni

Tissue specificityi

Expressed in roots.1 Publication

Gene expression databases

ExpressionAtlasiQ8VZW1. baseline and differential.
GenevisibleiQ8VZW1. AT.

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi12934. 184 interactors.
IntActiQ8VZW1. 181 interactors.
STRINGi3702.AT4G19030.1.

Structurei

3D structure databases

ProteinModelPortaliQ8VZW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi114 – 116NPA 13
Motifi233 – 235NPA 23

Domaini

Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala/Gly (NPA).

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0223. Eukaryota.
COG0580. LUCA.
HOGENOMiHOG000288286.
InParanoidiQ8VZW1.
KOiK09874.
OMAiGYGNARE.
OrthoDBiEOG09360N7X.
PhylomeDBiQ8VZW1.

Family and domain databases

CDDicd00333. MIP. 1 hit.
Gene3Di1.20.1080.10. 1 hit.
InterProiView protein in InterPro
IPR023271. Aquaporin-like.
IPR034294. Aquaporin_transptr.
IPR000425. MIP.
IPR022357. MIP_CS.
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiView protein in Pfam
PF00230. MIP. 1 hit.
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiView protein in PROSITE
PS00221. MIP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8VZW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADISGNGYG NAREEVVMVN LKDEVEHQQE MEDIHNPRPL KKQDSLLSVS
60 70 80 90 100
VPFLQKLIAE FLGTYFLVFT GCASVVVNMQ NDNVVTLPGI AIVWGLTIMV
110 120 130 140 150
LIYSLGHISG AHINPAVTIA FASCGRFPLK QVPAYVISQV IGSTLAAATL
160 170 180 190 200
RLLFGLDHDV CSGKHDVFIG SSPVGSDLQA FTMEFIVTFY LMFIISGVAT
210 220 230 240 250
DNRAIGELAG LAIGSTVLLN VLIAAPVSSA SMNPGRSLGP ALVYGCYKGI
260 270 280 290
WIYLVAPTLG AIAGAWVYNT VRYTDKPLRE ITKSGSFLKT VRIGST
Length:296
Mass (Da):31,715
Last modified:March 1, 2002 - v1
Checksum:i4D66695D9E879C68
GO

Sequence cautioni

The sequence CAA16760 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAA68906 differs from that shown. Reason: Erroneous initiation.Curated
The sequence CAB78905 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07625 mRNA. Translation: CAA68906.1. Different initiation.
AL021711 Genomic DNA. Translation: CAA16760.2. Sequence problems.
AL161550 Genomic DNA. Translation: CAB78905.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84127.1.
AY063796 mRNA. Translation: AAL36152.1.
AY117197 mRNA. Translation: AAM51272.1.
AY084497 mRNA. Translation: AAM61066.1.
PIRiH85214.
T05040.
RefSeqiNP_567572.1. NM_118021.4.
UniGeneiAt.5405.

Genome annotation databases

EnsemblPlantsiAT4G19030.1; AT4G19030.1; AT4G19030.
GeneIDi827641.
GrameneiAT4G19030.1; AT4G19030.1; AT4G19030.
KEGGiath:AT4G19030.

Similar proteinsi

Entry informationi

Entry nameiNIP11_ARATH
AccessioniPrimary (citable) accession number: Q8VZW1
Secondary accession number(s): O48595, O49416
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2003
Last sequence update: March 1, 2002
Last modified: August 30, 2017
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families