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Protein

60S ribosomal protein L10a-1

Gene

RPL10AA

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L10a-1
Gene namesi
Name:RPL10AA
Ordered Locus Names:At1g08360
ORF Names:T27G7.6
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G08360
TAIRilocus:2201811 AT1G08360

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001258321 – 21660S ribosomal protein L10a-1Add BLAST216

Proteomic databases

PaxDbiQ8VZB9
PRIDEiQ8VZB9

Expressioni

Gene expression databases

ExpressionAtlasiQ8VZB9 baseline and differential
GenevisibleiQ8VZB9 AT

Interactioni

Subunit structurei

Interacts with the GTPase NUG2.1 Publication

Protein-protein interaction databases

BioGridi22597, 2 interactors
STRINGi3702.AT1G08360.1

Structurei

3D structure databases

ProteinModelPortaliQ8VZB9
SMRiQ8VZB9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1570 Eukaryota
COG0081 LUCA
HOGENOMiHOG000207014
InParanoidiQ8VZB9
KOiK02865
OMAiNWHYLNI
OrthoDBiEOG09360N1C
PhylomeDBiQ8VZB9

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
InterProiView protein in InterPro
IPR002143 Ribosomal_L1
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
IPR023673 Ribosomal_L1_CS
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 1 hit
PIRSFiPIRSF002155 Ribosomal_L1, 1 hit
SUPFAMiSSF56808 SSF56808, 1 hit
PROSITEiView protein in PROSITE
PS01199 RIBOSOMAL_L1, 1 hit

Sequencei

Sequence statusi: Complete.

Q8VZB9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKLQSEAVR EAITTITGKS EAKKRNFVET IELQIGLKNY DPQKDKRFSG
60 70 80 90 100
SVKLPHIPRP KMKICMLGDA QHVEEAEKMG LENMDVESLK KLNKNKKLVK
110 120 130 140 150
KLAKKYHAFL ASESVIKQIP RLLGPGLNKA GKFPTLVSHQ ESLESKVNET
160 170 180 190 200
KATVKFQLKK VLCMGVAVGN LSMEEKQIFQ NVQMSVNFLV SLLKKNWQNV
210
RCLYLKSTMG PPQRIF
Length:216
Mass (Da):24,469
Last modified:March 1, 2002 - v1
Checksum:i4BB3993AC48E49D3
GO

Sequence cautioni

The sequence AAF22886 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006932 Genomic DNA Translation: AAF22886.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE28281.1
AY065077 mRNA Translation: AAL38253.1
AY114542 mRNA Translation: AAM47861.1
PIRiC86217
RefSeqiNP_563813.2, NM_100709.5
UniGeneiAt.24240

Genome annotation databases

EnsemblPlantsiAT1G08360.1; AT1G08360.1; AT1G08360
GeneIDi837356
GrameneiAT1G08360.1; AT1G08360.1; AT1G08360
KEGGiath:AT1G08360

Similar proteinsi

Entry informationi

Entry nameiR10A1_ARATH
AccessioniPrimary (citable) accession number: Q8VZB9
Secondary accession number(s): Q9SJF4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 27, 2003
Last sequence update: March 1, 2002
Last modified: April 25, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health