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Protein

60S ribosomal protein L30-2

Gene

RPL30B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L30-2
Gene namesi
Name:RPL30B
Ordered Locus Names:At1g77940
ORF Names:F28K19.15
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G77940
TAIRilocus:2029401 AT1G77940

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002447481 – 11260S ribosomal protein L30-2Add BLAST112

Proteomic databases

PaxDbiQ8VZ19
PRIDEiQ8VZ19

Expressioni

Gene expression databases

ExpressionAtlasiQ8VZ19 baseline and differential
GenevisibleiQ8VZ19 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G77940.1

Structurei

3D structure databases

ProteinModelPortaliQ8VZ19
SMRiQ8VZ19
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2988 Eukaryota
COG1911 LUCA
HOGENOMiHOG000055224
InParanoidiQ8VZ19
KOiK02908
OMAiYYAVLGK
OrthoDBiEOG09360TU0
PhylomeDBiQ8VZ19

Family and domain databases

Gene3Di3.30.1330.30, 1 hit
InterProiView protein in InterPro
IPR029064 L30e-like
IPR000231 Ribosomal_L30e
IPR022991 Ribosomal_L30e_CS
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45
PANTHERiPTHR11449:SF8 PTHR11449:SF8, 1 hit
PfamiView protein in Pfam
PF01248 Ribosomal_L7Ae, 1 hit
SUPFAMiSSF55315 SSF55315, 1 hit
PROSITEiView protein in PROSITE
PS00709 RIBOSOMAL_L30E_1, 1 hit
PS00993 RIBOSOMAL_L30E_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q8VZ19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST
60 70 80 90 100
NCPPLRRSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG
110
DSDIIKSIPG DQ
Length:112
Mass (Da):12,290
Last modified:March 1, 2002 - v1
Checksum:i46B1BB752A5D034B
GO

Sequence cautioni

The sequence AAF17698 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009243 Genomic DNA Translation: AAF17698.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE36049.1
AY065370 mRNA Translation: AAL38811.1
AY114036 mRNA Translation: AAM45084.1
BT004749 mRNA Translation: AAO44015.1
AY085881 mRNA Translation: AAM63094.1
RefSeqiNP_565164.1, NM_106443.5
UniGeneiAt.16535
At.67705

Genome annotation databases

EnsemblPlantsiAT1G77940.1; AT1G77940.1; AT1G77940
GeneIDi844129
GrameneiAT1G77940.1; AT1G77940.1; AT1G77940
KEGGiath:AT1G77940

Similar proteinsi

Entry informationi

Entry nameiRL302_ARATH
AccessioniPrimary (citable) accession number: Q8VZ19
Secondary accession number(s): Q9SH07
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: March 1, 2002
Last modified: April 25, 2018
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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