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Protein

Endoglucanase 16

Gene

At3g43860

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei407By similarity1
Active sitei458By similarity1
Active sitei467By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Enzyme and pathway databases

BioCyciARA:AT3G43860-MONOMER

Protein family/group databases

CAZyiGH9 Glycoside Hydrolase Family 9

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 16 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 16
Gene namesi
Ordered Locus Names:At3g43860
ORF Names:T28A8.150
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G43860
TAIRilocus:2101099 AT3G43860

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 30Sequence analysisAdd BLAST30
ChainiPRO_000024926831 – 486Endoglucanase 16Add BLAST456

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi29N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ8VYG3

Expressioni

Gene expression databases

ExpressionAtlasiQ8VYG3 baseline and differential
GenevisibleiQ8VYG3 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G43860.1

Structurei

3D structure databases

ProteinModelPortaliQ8VYG3
SMRiQ8VYG3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IHSN Eukaryota
ENOG410ZZU6 LUCA
HOGENOMiHOG000021033
InParanoidiQ8VYG3
KOiK01179
OMAiSNSGYND
OrthoDBiEOG093609RT
PhylomeDBiQ8VYG3

Family and domain databases

Gene3Di1.50.10.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR001701 Glyco_hydro_9
PfamiView protein in Pfam
PF00759 Glyco_hydro_9, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8VYG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANYKGRGNV MIRSMLLGLY GIINIVCVNG TFINYKDALT KSLIFLEAQR
60 70 80 90 100
SGKLPPNNRV PWRGDSALDD GKLVNVDLSG GYYDAGDNVK YGLPMAFTIT
110 120 130 140 150
TLAWSTITYE KELRATGELE NARAAIRWGT DYFLKCASRK NRLYVQVGDP
160 170 180 190 200
NADHQCWARP ENMKTPRTVL EISDKVPGTE IAAEAAAAFA ASSIVFRHVD
210 220 230 240 250
HKYARRLLNK AKLLFKLAKS HKGTYDGECP FYCSNSGYND ELIWAATWLY
260 270 280 290 300
KATRNHLYLS YLKFEAISAY VAEFSWDLKY AGAQILITKL IFEGHKGLDL
310 320 330 340 350
YKQQADSFVC SNLPGSPYHQ VFTTPGGMIH LRDGANSQYV TATAFLFSAY
360 370 380 390 400
ADILQKHNQK ISCGSHQFDS THLMAFAKKQ IDYILGHNPQ GRSYMVGFGP
410 420 430 440 450
NPPKQAHHRG ASVPMHEANA PLSCPLSFVK WYNKNVPNAN ELTGAILGGP
460 470 480
DRQDKFQDLR WTSVYTEPCT YINSIAVGVL AKLAAA
Length:486
Mass (Da):54,120
Last modified:March 1, 2002 - v1
Checksum:i0511043BBFCCD036
GO

Sequence cautioni

The sequence CAB83158 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL162691 Genomic DNA Translation: CAB83158.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE77836.1
CP002686 Genomic DNA Translation: ANM65868.1
AY072099 mRNA Translation: AAL59921.1
PIRiT47422
RefSeqiNP_001327805.1, NM_001339113.1
NP_189972.2, NM_114254.3
UniGeneiAt.42700

Genome annotation databases

EnsemblPlantsiAT3G43860.1; AT3G43860.1; AT3G43860
AT3G43860.2; AT3G43860.2; AT3G43860
GeneIDi823499
GrameneiAT3G43860.1; AT3G43860.1; AT3G43860
AT3G43860.2; AT3G43860.2; AT3G43860
KEGGiath:AT3G43860

Similar proteinsi

Entry informationi

Entry nameiGUN16_ARATH
AccessioniPrimary (citable) accession number: Q8VYG3
Secondary accession number(s): Q9LZG2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: March 1, 2002
Last modified: April 25, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health