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Protein
Submitted name:

NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein

Gene

At3g13180

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciARA:GQT-1221-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
NOL1/NOP2/sun family protein / antitermination NusB domain-containing proteinImported
Submitted name:
Putative sun (Fmu) proteinImported
Submitted name:
Putative sun protein fmuImported
Gene namesi
Ordered Locus Names:At3g13180Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G13180.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G13180.1.

Structurei

3D structure databases

SMRiQ8VYC4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini246 – 522SAM_MT_RSMB_NOPInterPro annotationAdd BLAST277

Phylogenomic databases

eggNOGiKOG1122. Eukaryota.
COG0144. LUCA.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG0936073E.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR023268. RCMT_RsmB-rel_pln.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02009. RCMTFMUVIRPL.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8VYC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQLLSFRVY LSAETQKASP GSFKRTQKTR KPFSPDRRGP VAPSRKSQNL
60 70 80 90 100
NLEVSPHRAV SAVRLMRIEY GGAFADLLNE KGKGSGSNEM SYVERTIGFR
110 120 130 140 150
TRDLDDRDLR LVTDVVGGTI RWRRYLDHLI GSLCHNERTF RNMEPLLLQI
160 170 180 190 200
LRIGVYEIIK RDMPPYAVVD ENVRLAKVAL RPGAGDFVNG ILRKLVSLKE
210 220 230 240 250
KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL DEATKLMIWN
260 270 280 290 300
NNDPGFSLRA NTGRDITRAD LVERLNSLKV PHELSLHLEE FVRIKTGLQT
310 320 330 340 350
VVQAGLLKEG ICSVQDESAG LIVSVVKPQP GERIMDACAA PGGKTLFMAS
360 370 380 390 400
CLKGQGMIYA MDVNEGRLRI LGETAKSHQV DGLITTIHSD LRVFAETNEV
410 420 430 440 450
QYDKVLLDAP CSGLGVLSKR ADLRWNRKLE DMLELTKLQD ELLDSASKLV
460 470 480 490 500
KHGGVLVYST CSIDPEENEG RVEAFLLRHP EFTIDPVTSF VPSSFVTSQG
510 520
FFLSNPVKHS LDGAFAARLV RAL
Length:523
Mass (Da):58,345
Last modified:March 1, 2002 - v1
Checksum:iB97FF8E9B64591DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY072189 mRNA. Translation: AAL60011.1.
AY117322 mRNA. Translation: AAM51397.1.
CP002686 Genomic DNA. Translation: AEE75306.1.
AK226254 mRNA. Translation: BAE98415.1.
RefSeqiNP_187924.2. NM_112158.5.
UniGeneiAt.39475.

Genome annotation databases

EnsemblPlantsiAT3G13180.1; AT3G13180.1; AT3G13180.
GeneIDi820508.
GrameneiAT3G13180.1; AT3G13180.1; AT3G13180.
KEGGiath:AT3G13180.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY072189 mRNA. Translation: AAL60011.1.
AY117322 mRNA. Translation: AAM51397.1.
CP002686 Genomic DNA. Translation: AEE75306.1.
AK226254 mRNA. Translation: BAE98415.1.
RefSeqiNP_187924.2. NM_112158.5.
UniGeneiAt.39475.

3D structure databases

SMRiQ8VYC4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G13180.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G13180.1; AT3G13180.1; AT3G13180.
GeneIDi820508.
GrameneiAT3G13180.1; AT3G13180.1; AT3G13180.
KEGGiath:AT3G13180.

Organism-specific databases

TAIRiAT3G13180.

Phylogenomic databases

eggNOGiKOG1122. Eukaryota.
COG0144. LUCA.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG0936073E.

Enzyme and pathway databases

BioCyciARA:GQT-1221-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR023268. RCMT_RsmB-rel_pln.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02009. RCMTFMUVIRPL.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8VYC4_ARATH
AccessioniPrimary (citable) accession number: Q8VYC4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: November 30, 2016
This is version 115 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.