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Protein

Vesicle-associated membrane protein 723

Gene

VAMP723

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in the targeting and/or fusion of transport vesicles to their target membrane.1 Publication

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Vesicle-associated membrane protein 7231 Publication
Short name:
AtVAMP7231 Publication
Gene namesi
Name:VAMP7231 Publication
Ordered Locus Names:At2g33110Imported
ORF Names:F25I18.15Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G33110.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 192192CytoplasmicSequence analysisAdd
BLAST
Transmembranei193 – 21321Helical; Anchor for type IV membrane proteinSequence analysisAdd
BLAST
Topological domaini214 – 2174VesicularSequence analysis

GO - Cellular componenti

  • endoplasmic reticulum Source: TAIR
  • endoplasmic reticulum membrane Source: UniProtKB-SubCell
  • integral component of membrane Source: UniProtKB-KW
  • SNARE complex Source: GO_Central
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 217217Vesicle-associated membrane protein 723PRO_0000206756Add
BLAST

Proteomic databases

PaxDbiQ8VY69.
PRIDEiQ8VY69.

Expressioni

Tissue specificityi

Highly expressed in stems and roots. Detected in flowers and leaves.1 Publication

Gene expression databases

GenevisibleiQ8VY69. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi3220. 8 interactions.
STRINGi3702.AT2G33110.1.

Structurei

3D structure databases

ProteinModelPortaliQ8VY69.
SMRiQ8VY69. Positions 5-162.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini10 – 114105LonginPROSITE-ProRule annotationAdd
BLAST
Domaini130 – 18657v-SNARE coiled-coil homologyPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the synaptobrevin family.Curated
Contains 1 longin domain.PROSITE-ProRule annotation
Contains 1 v-SNARE coiled-coil homology domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0859. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000042712.
InParanoidiQ8VY69.
KOiK08511.
PhylomeDBiQ8VY69.

Family and domain databases

Gene3Di1.10.3840.10. 1 hit.
3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8VY69-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQQSLFYSF IARGTVILVE FTDFKGNFTS VAAQYLENLP SSNNKFTYNC
60 70 80 90 100
DGHTFNDLVE NGFTYCVVAV DSAGREIPMA FLERVKEDFY KRYGGEKAAT
110 120 130 140 150
DQANSLNKEF GSNLKEHMQY CMDHPDEISN LAKAKAQVSE VKSLMMENIE
160 170 180 190 200
KVLARGVICE MLGSSESQPQ AFYIKRTQMK RKKWFQNMKI KLIVLAIIIA
210
LILIIILSVC GGFNCGK
Length:217
Mass (Da):24,493
Last modified:March 1, 2002 - v1
Checksum:iFE270AE7E05A5097
GO

Sequence cautioni

The sequence AAC04922.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002334 Genomic DNA. Translation: AAC04922.1. Sequence problems.
CP002685 Genomic DNA. Translation: AEC08786.1.
AY072400 mRNA. Translation: AAL62392.1.
BT000209 mRNA. Translation: AAN15528.1.
PIRiE84741.
RefSeqiNP_850201.1. NM_179870.3.
UniGeneiAt.42684.

Genome annotation databases

EnsemblPlantsiAT2G33110.1; AT2G33110.1; AT2G33110.
GeneIDi817873.
GrameneiAT2G33110.1; AT2G33110.1; AT2G33110.
KEGGiath:AT2G33110.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002334 Genomic DNA. Translation: AAC04922.1. Sequence problems.
CP002685 Genomic DNA. Translation: AEC08786.1.
AY072400 mRNA. Translation: AAL62392.1.
BT000209 mRNA. Translation: AAN15528.1.
PIRiE84741.
RefSeqiNP_850201.1. NM_179870.3.
UniGeneiAt.42684.

3D structure databases

ProteinModelPortaliQ8VY69.
SMRiQ8VY69. Positions 5-162.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi3220. 8 interactions.
STRINGi3702.AT2G33110.1.

Proteomic databases

PaxDbiQ8VY69.
PRIDEiQ8VY69.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G33110.1; AT2G33110.1; AT2G33110.
GeneIDi817873.
GrameneiAT2G33110.1; AT2G33110.1; AT2G33110.
KEGGiath:AT2G33110.

Organism-specific databases

TAIRiAT2G33110.

Phylogenomic databases

eggNOGiKOG0859. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000042712.
InParanoidiQ8VY69.
KOiK08511.
PhylomeDBiQ8VY69.

Miscellaneous databases

PROiQ8VY69.

Gene expression databases

GenevisibleiQ8VY69. AT.

Family and domain databases

Gene3Di1.10.3840.10. 1 hit.
3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors."
    Sanderfoot A.A., Assaad F.F., Raikhel N.V.
    Plant Physiol. 124:1558-1569(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.
  5. "Systematic analysis of SNARE molecules in Arabidopsis: dissection of the post-Golgi network in plant cells."
    Uemura T., Ueda T., Ohniwa R.L., Nakano A., Takeyasu K., Sato M.H.
    Cell Struct. Funct. 29:49-65(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, SUBCELLULAR LOCATION.

Entry informationi

Entry nameiVA723_ARATH
AccessioniPrimary (citable) accession number: Q8VY69
Secondary accession number(s): O49322
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 17, 2003
Last sequence update: March 1, 2002
Last modified: June 8, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.