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Q8VSD5 (Q8VSD5_SHIFL) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL AAL72429.1
Gene names
Name:ORF169b EMBL AAP79026.1
Ordered Locus Names:CP0209 EMBL AAL72429.1
Encoded onPlasmid pCP301 Ref.3 EMBL AAL72429.1
Plasmid pINV_F6_M1382 Ref.2 EMBL AAP79026.1
OrganismShigella flexneri [Complete proteome] [HAMAP]
Taxonomic identifier623 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length212 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q8VSD5 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: B474CCF80FAD884F

FASTA21223,341
        10         20         30         40         50         60 
MINGVSLQGT AGYEAHTEEG NVNVKKLLES LNSKSLGDMD KDSELAATLQ KMINPSGGDG 

        70         80         90        100        110        120 
NCSGCALHAC MAMLGYGVRE APVPNEISEY MTGFFHRHLE QIDSEGIVSH PNETYSKFRE 

       130        140        150        160        170        180 
RIAENILQNT SKGSVVMISI EQATHWIAGF NDGEKIMFLD VQTGKGFNLY DPVEKSPDAF 

       190        200        210 
VDENSSVQVI HVSDQEFDHY ANSSSWKSKR LC 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157."
Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y. expand/collapse author list , Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H., Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.
Nucleic Acids Res. 30:4432-4441(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 301 EMBL AAL72429.1, 301 / Serotype 2a and pCP301.
[2]"Comparison of two major forms of the Shigella virulence plasmid pINV: positive selection is a major force driving the divergence."
Lan R., Stevenson G., Reeves P.R.
Infect. Immun. 71:6298-6306(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Jin Q., Zhang J.Y., Liu H., Yang J., Yang F., Zhang X.B., Wang J.H., Yang G.W., Wu H.T., Dong J., Sun L.L., Xue Y., Zhao A.L., Gao Y.S., Zhu J.P., Kan B., Chen S.X., Yao Z.J. expand/collapse author list , He B.K., Chen R.S., Ma D.L., Yuan Z.H., Xu J.G., Wang Y., Shen Y., Lu W.C., Qiang B.Q., Wen Y.M., Hou Y.D.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 301 EMBL AAL72429.1.
[4]"The Shigella flexneri effector OspI deamidates UBC13 to dampen the inflammatory response."
Sanada T., Kim M., Mimuro H., Suzuki M., Ogawa M., Oyama A., Ashida H., Kobayashi T., Koyama T., Nagai S., Shibata Y., Gohda J., Inoue J., Mizushima T., Sasakawa C.
Nature 483:623-626(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.01 ANGSTROMS).
[5]"Structural basis for the recognition of Ubc13 by the Shigella flexneri effector OspI."
Nishide A., Kim M., Takagi K., Himeno A., Sanada T., Sasakawa C., Mizushima T.
J. Mol. Biol. 425:2623-2631(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.96 ANGSTROMS).
[6]"Structure Analysis of Ubc13 Inactivation."
Fu P., Jin M., Zhang X., Xu L., Xia Z., Zhu Y.
Submitted (JAN-2013) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF386526 Genomic DNA. Translation: AAL72429.1.
AY206443 Genomic DNA. Translation: AAP79026.1.
RefSeqNP_858342.1. NC_004851.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3B21X-ray2.01A1-212[»]
3W30X-ray2.99A/B1-212[»]
3W31X-ray2.96A1-212[»]
4IP3X-ray2.30A1-212[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-59658N.
STRING198214.CP0209.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL72429; AAL72429; CP0209.
GeneID1238132.
KEGGsfl:CP0209.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000181429.
OrthoDBEOG6NKQZQ.

Family and domain databases

InterProIPR028908. Tox-PL_dom.
[Graphical view]
PfamPF15644. Tox-PL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8VSD5_SHIFL
AccessionPrimary (citable) accession number: Q8VSD5
Secondary accession number(s): Q6XVV4
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)