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Protein
Submitted name:

ISSfl4 ORF2,Transposase and inactivated derivatives,IS66 Orf2 like protein

Gene

NCTC1_00387

Organism
Shigella flexneri
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
ISSfl4 ORF2,Transposase and inactivated derivatives,IS66 Orf2 like proteinImported
Gene namesi
ORF Names:NCTC1_00387Imported
OrganismiShigella flexneriImported
Taxonomic identifieri623 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Interactioni

Protein-protein interaction databases

STRINGi198214.SF3323.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222383.
KOiK07484.
OMAiMPEVITL.
OrthoDBiEOG6SFPHH.

Family and domain databases

InterProiIPR008878. Transposase_IS66_Orf2.
[Graphical view]
PfamiPF05717. TnpB_IS66. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8VSD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITLPTGTKI WIIAGITDMR CGFNGLASKV QNTLKDDPFS GHIFVFRGRS
60 70 80 90 100
GKMVKILWAD RDGLCLFAKR LERGRFVWPV TREGKVHLTP AQLSMLLEGI
110
AWPHPKRTER PGIRI
Length:115
Mass (Da):13,027
Last modified:March 1, 2002 - v1
Checksum:iF2AC5DA40C7377D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LM651928 Genomic DNA. Translation: CDX05668.1.
RefSeqiNP_709079.1. NC_004337.2.
NP_858345.1. NC_004851.1.

Genome annotation databases

EnsemblBacteriaiAAL72465; AAL72465; SF_p0212.
AAN44786; AAN44786; SF3323.
AAP15910; AAP15910; S0382.
GeneIDi1027029.
1238168.
KEGGisfl:CP0212.
sfl:SF3323.
sfx:S0382.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LM651928 Genomic DNA. Translation: CDX05668.1.
RefSeqiNP_709079.1. NC_004337.2.
NP_858345.1. NC_004851.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198214.SF3323.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL72465; AAL72465; SF_p0212.
AAN44786; AAN44786; SF3323.
AAP15910; AAP15910; S0382.
GeneIDi1027029.
1238168.
KEGGisfl:CP0212.
sfl:SF3323.
sfx:S0382.

Phylogenomic databases

HOGENOMiHOG000222383.
KOiK07484.
OMAiMPEVITL.
OrthoDBiEOG6SFPHH.

Family and domain databases

InterProiIPR008878. Transposase_IS66_Orf2.
[Graphical view]
PfamiPF05717. TnpB_IS66. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Aslett A.Martin., De Silva Nishadi
    Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ8VSD3_SHIFL
AccessioniPrimary (citable) accession number: Q8VSD3
Secondary accession number(s): Q7C2Y2, Q83JC8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: May 27, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.