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Q8VSD3 (Q8VSD3_SHIFL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

ISSfl4 ORF2 EMBL AAL72465.1
Gene names
Ordered Locus Names:CP0212 EMBL AAL72465.1, S0382 EMBL AAP15910.1, SF3323 EMBL AAN44786.1
Encoded onPlasmid pCP301 Ref.3 EMBL AAL72465.1
OrganismShigella flexneri [Complete proteome] [HAMAP]
Taxonomic identifier623 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length115 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL AAL72465.1
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q8VSD3 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: F2AC5DA40C7377D4

FASTA11513,027
        10         20         30         40         50         60 
MITLPTGTKI WIIAGITDMR CGFNGLASKV QNTLKDDPFS GHIFVFRGRS GKMVKILWAD 

        70         80         90        100        110 
RDGLCLFAKR LERGRFVWPV TREGKVHLTP AQLSMLLEGI AWPHPKRTER PGIRI 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157."
Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J., Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L., Xue Y. expand/collapse author list , Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H., Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.
Nucleic Acids Res. 30:4432-4441(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 301 EMBL AAL72465.1, 301 / Serotype 2a and pCP301.
[2]"Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T."
Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G., Mayhew G.F., Plunkett G.III., Rose D.J., Darling A., Mau B., Perna N.T., Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R.
Infect. Immun. 71:2775-2786(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2457T EMBL AAP15910.1 and ATCC 700930 / 2457T / Serotype 2a.
[3]Jin Q., Zhang J.Y., Liu H., Yang J., Yang F., Zhang X.B., Wang J.H., Yang G.W., Wu H.T., Dong J., Sun L.L., Xue Y., Zhao A.L., Gao Y.S., Zhu J.P., Kan B., Chen S.X., Yao Z.J. expand/collapse author list , He B.K., Chen R.S., Ma D.L., Yuan Z.H., Xu J.G., Wang Y., Shen Y., Lu W.C., Qiang B.Q., Wen Y.M., Hou Y.D.
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 301 EMBL AAL72465.1.
[4]Jin Q., Shen Y., Wang J.H., Liu H., Yang J., Yang F., Zhang X.B., Zhang J.Y., Yang G.W., Wu H.T., Dong J., Sun L.L., Xue Y., Zhao A.L., Gao Y.S., Zhu J.P., Chen S.X., Yao Z.J. expand/collapse author list , Wang Y., Lu W.C., Qiang B.Q., Wen Y.M., Hou Y.D.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 301 EMBL AAN44786.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF386526 Genomic DNA. Translation: AAL72465.1.
AE005674 Genomic DNA. Translation: AAN44786.1.
AE014073 Genomic DNA. Translation: AAP15910.1.
RefSeqNP_709079.1. NC_004337.2.
NP_836104.1. NC_004741.1.
NP_858345.1. NC_004851.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING198214.SF3323.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL72465; AAL72465; CP0212.
AAN44786; AAN44786; SF3323.
AAP15910; AAP15910; S0382.
GeneID1027029.
1076821.
1238168.
KEGGsfl:CP0212.
sfl:SF3323.
sfx:S0382.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222383.
KOK07484.
OMATRVWIAG.
OrthoDBEOG6SFPHH.
ProtClustDBCLSK512642.

Family and domain databases

InterProIPR008878. Transposase_IS66_Orf2.
[Graphical view]
PfamPF05717. TnpB_IS66. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8VSD3_SHIFL
AccessionPrimary (citable) accession number: Q8VSD3
Secondary accession number(s): Q7C2Y2, Q83JC8
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: April 16, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)