Q8VMV1 (Q8VMV1_METEX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL CAD20225.1
EC=4.1.2.4 EMBL CAD20225.1

Gene names

Name:

deoC EMBL CAD20225.1

Organism

Methylobacterium extorquens (Methylobacterium dichloromethanicum) (Protomonas extorquens) EMBL CAD20225.1

Taxonomic identifier

408 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium extorquens group

Protein attributes

Sequence length	257 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343
Subcellular location	Cytoplasm By similarity SAAS SAAS011343.

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS011343
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL CAD20225.1
Gene Ontology (GO)
Biological_process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro deoxyribose phosphate catabolic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8VMV1 [UniParc]. Last modified March 1, 2002. Version 1. Checksum: 339AF48824EA1FCE	FASTA	257	26,854
	10 20 30 40 50 60 MTASAPLPPQ DAVRVRADLA RRALPLLDLT DLSDACTAAA VEDLCEKARA SGVAAVCVWP 70 80 90 100 110 120 RFVADSVRGL RGSGVRVATV VNFPEGGEAV ERTVAETQAT LADGADEIDL VLPYRALMRG 130 140 150 160 170 180 DAESARAMVE AVRAACAGRL LKVILETGEL EDPDLIAQAS RLSLEAGADF IKTSTGKTTV 190 200 210 220 230 240 SATLPAAEIM LEAIRAHGGD RPVGLKVSGG LRRVEDAAAY LALADRMMGP DWVSPNTFRI 250 GASALHAELV RAGEAAR

References

[1]	"Aerobic microbial degradation of chloromethane." Studer A. Thesis (2001), Department of Institute of Microbiology, ETH Zurich, Zurich, Switzerland Cited for: NUCLEOTIDE SEQUENCE. Strain: CM4 EMBL CAD20225.1.
[2]	"Mutants of Methylobacterium chloromethanicum strain CM4 unable to grow with chloromethane." Studer A., Leisinger T., Vuilleumier S. Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: CM4 EMBL CAD20225.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ426459 Genomic DNA. Translation: CAD20225.1.
RefSeq	YP_002421957.1. NC_011757.1.
3D structure databases
HSSP	HSSP built from PDB template 1JCL based on UniProtKB P00882.
ProteinModelPortal	Q8VMV1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7114190.
KEGG	mch:Mchl_3191.
PATRIC	22500682. VBIMetChl132133_3166.
Phylogenomic databases
KO	K01619.
ProtClustDB	CLSK2331439.
Enzyme and pathway databases
UniPathway	UPA00002; UER00468.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/FbaB/lacD_aldolase. [Graphical view]
PANTHER	PTHR10889. PTHR10889. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. deoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8VMV1_METEX

Accession

Primary (citable) accession number: Q8VMV1

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)