Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q8VIL0 (Q8VIL0_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 96. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Cyp26a1 RGD 620161
Synonyms:CYP26A1 EMBL AAL32056.2
OrganismRattus norvegicus (Rat) EMBL AAL32056.2
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the cytochrome P450 family. RuleBase RU000461

Sequences

Sequence LengthMass (Da)Tools
Q8VIL0 [UniParc].

Last modified December 6, 2005. Version 2.
Checksum: 242A6441F0E399EC

FASTA49756,174
        10         20         30         40         50         60 
MGLPALLASA LCTFVLPLLL FLAALKLWDL YCVSSRDRSC ALPLPPGTMG FPFFGETLQM 

        70         80         90        100        110        120 
VLQRRKFLQM KRRKYGFIYK THLFGRPTVR VMGADNVRRI LLGEHRLVSV HWPASVRTIL 

       130        140        150        160        170        180 
GAGCLSNLHD SSHKQRKKVI MQAFNREALQ CYVPVIAEEV SGCLEQWLSC GERGLLVYPE 

       190        200        210        220        230        240 
VKRLMFRIAM RILLGCEPGP AGGGEDEQQL VEAFEEMTRN LFSLPIDVPF SGLYRGVKAR 

       250        260        270        280        290        300 
NLIHARIEEN IRAKIRRLQA AEPDAGCKDA LQLLIEHSWE RGERLDMQAL KQSSTELLFG 

       310        320        330        340        350        360 
GHETTASAAT SLITYLGLYP HVLQKVREEI KSKGLLCKSH HEDKLDMETL EQLKYIGCVI 

       370        380        390        400        410        420 
KETLRLNPPV PGGFRVALKT FELNGYQIPK GWNVIYSICD THDVADSFTN KEEFNPDRFT 

       430        440        450        460        470        480 
SLHPEDTSRF SFIPFGGGLR SCVGKEFAKI LLKIFTVELA RRCDWQLLNG PPTMKTSPPV 

       490 
YPVDNLPARF THFQGDI 

« Hide

References

[1]"Cloning of rat cytochrome P450RAI (CYP26) cDNA and regulation of its gene expression by all-trans-retinoic acid in vivo."
Wang Y., Zolfaghari R., Ross A.C.
Arch. Biochem. Biophys. 401:235-243(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Liver EMBL AAL32056.2.
[2]Zolfaghari R., Ross A.C.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Liver EMBL AAL32056.2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF439720 mRNA. Translation: AAL32056.2.
RefSeqNP_569092.2. NM_130408.2.
UniGeneRn.81072.

3D structure databases

ProteinModelPortalQ8VIL0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID154985.
KEGGrno:154985.
UCSCRGD:620161. rat.

Organism-specific databases

CTD1592.
RGD620161. Cyp26a1.

Phylogenomic databases

HOVERGENHBG051099.
InParanoidQ8VIL0.
KOK07437.

Gene expression databases

GenevestigatorQ8VIL0.

Family and domain databases

Gene3D1.10.630.10. 1 hit.
InterProIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002403. Cyt_P450_E_grp-IV.
[Graphical view]
PfamPF00067. p450. 1 hit.
[Graphical view]
PRINTSPR00465. EP450IV.
PR00385. P450.
SUPFAMSSF48264. SSF48264. 1 hit.
PROSITEPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio620872.

Entry information

Entry nameQ8VIL0_RAT
AccessionPrimary (citable) accession number: Q8VIL0
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: December 6, 2005
Last modified: January 22, 2014
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)