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Protein

Tetratricopeptide repeat protein 39C

Gene

Ttc39c

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Tetratricopeptide repeat protein 39C
Short name:
TPR repeat protein 39C
Gene namesi
Name:Ttc39c
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

Organism-specific databases

MGIiMGI:1919997 Ttc39c

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002743531 – 580Tetratricopeptide repeat protein 39CAdd BLAST580

Proteomic databases

MaxQBiQ8VE09
PaxDbiQ8VE09
PRIDEiQ8VE09

PTM databases

iPTMnetiQ8VE09
PhosphoSitePlusiQ8VE09

Interactioni

Protein-protein interaction databases

IntActiQ8VE09, 1 interactor
MINTiQ8VE09
STRINGi10090.ENSMUSP00000025294

Structurei

3D structure databases

ProteinModelPortaliQ8VE09
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati312 – 345TPR 1Add BLAST34
Repeati350 – 383TPR 2Add BLAST34
Repeati482 – 515TPR 3Add BLAST34

Sequence similaritiesi

Belongs to the TTC39 family.Curated

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

eggNOGiKOG3783 Eukaryota
ENOG410XTBZ LUCA
HOGENOMiHOG000007788
HOVERGENiHBG081333
InParanoidiQ8VE09
PhylomeDBiQ8VE09

Family and domain databases

Gene3Di1.25.40.10, 1 hit
InterProiView protein in InterPro
IPR019412 Iml2/TPR_39
IPR011990 TPR-like_helical_dom_sf
PANTHERiPTHR31859 PTHR31859, 1 hit
PfamiView protein in Pfam
PF10300 DUF3808, 1 hit
SUPFAMiSSF48452 SSF48452, 1 hit

Sequencei

Sequence statusi: Complete.

Q8VE09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSEEQWPR RREDGDPDAA AAPLQDAELA LAGINMLLNN GFRESDQLFK
60 70 80 90 100
QYRNHSPLMS FGASFVSFLN AMMTFEEEKM QLACDDLKTT EKLCESEEAG
110 120 130 140 150
VIETIKNKIK KNVDARKSTP SMVDRLQRQI IIADCQVYLA VLSFVKQELS
160 170 180 190 200
AYIKGGWILR KAWKIYSKCY VDINALQELY QKKLTEEPLA SDAANDNHVV
210 220 230 240 250
AEGVTEESLS RLKGAVSFGY GLFHLCISMV PPNLLKIINL LGFPGDRLQG
260 270 280 290 300
LSSLTYASES KDMKAPLATL ALLWYHTVVR PFFALDGSDN KGGLDEAKAI
310 320 330 340 350
LLRKESAYPN SSLFMFFKGR IQRLECQINS ALTSFHTALE LAVDQREIQH
360 370 380 390 400
VCLYEIGWCS MIELNFKDAF DSFERLKNES RWSQCYYAYL TAVCQGATGD
410 420 430 440 450
VDGAQLVFKE VQKLFKRKNN QIEQFSVKKA ERFRKQTPTR ALCVLASIEV
460 470 480 490 500
LYLWKALPNC SFPNLQRMSQ ACHEVDDSSV VGLKHLLLGA IHKCLGNSQD
510 520 530 540 550
ALQFFQRAAR DELCRQSNSY VPPYACYELG CLLLDSAETV GRGRTLLLQA
560 570 580
KEDFSGYDFE NRLHVRIHAA LASLRELVPQ
Length:580
Mass (Da):65,445
Last modified:February 6, 2007 - v2
Checksum:i654A029231C284B2
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti28 – 29EL → DV in BAB28758 (PubMed:16141072).Curated2
Sequence conflicti408F → L in BAB28758 (PubMed:16141072).Curated1
Sequence conflicti526C → S in AAH20021 (PubMed:15489334).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK013267 mRNA Translation: BAB28758.1
BC020021 mRNA Translation: AAH20021.1
CCDSiCCDS29065.1
RefSeqiNP_082617.2, NM_028341.4
UniGeneiMm.52526

Genome annotation databases

GeneIDi72747
KEGGimmu:72747

Similar proteinsi

Entry informationi

Entry nameiTT39C_MOUSE
AccessioniPrimary (citable) accession number: Q8VE09
Secondary accession number(s): Q9CYV6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 6, 2007
Last modified: April 25, 2018
This is version 102 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health