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Q8VCK2

- Q8VCK2_MOUSE

UniProt

Q8VCK2 - Q8VCK2_MOUSE

Protein
Submitted name:

Ctsd protein

Gene

Ctsd

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (01 Mar 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. aspartic-type endopeptidase activity Source: MGI
    2. peptidase activity Source: MGI

    GO - Biological processi

    1. autophagic vacuole assembly Source: MGI
    2. proteolysis Source: MGI

    Keywords - Molecular functioni

    Aspartyl proteaseUniRule annotation, Hydrolase, Protease

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ctsd proteinImported
    Gene namesi
    Name:CtsdImported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

    Organism-specific databases

    MGIiMGI:88562. Ctsd.

    Subcellular locationi

    GO - Cellular componenti

    1. lysosome Source: MGI
    2. mitochondrion Source: MGI

    PTM / Processingi

    Proteomic databases

    PRIDEiQ8VCK2.

    Expressioni

    Gene expression databases

    GenevestigatoriQ8VCK2.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8VCK2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the peptidase A1 family.UniRule annotation

    Phylogenomic databases

    HOVERGENiHBG000482.

    Family and domain databases

    Gene3Di2.40.70.10. 1 hit.
    InterProiIPR001461. Aspartic_peptidase.
    IPR001969. Aspartic_peptidase_AS.
    IPR021109. Peptidase_aspartic_dom.
    [Graphical view]
    PANTHERiPTHR13683. PTHR13683. 1 hit.
    PfamiPF00026. Asp. 1 hit.
    [Graphical view]
    PRINTSiPR00792. PEPSIN.
    SUPFAMiSSF50630. SSF50630. 1 hit.
    PROSITEiPS00141. ASP_PROTEASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q8VCK2-1 [UniParc]FASTAAdd to Basket

    « Hide

    EGSPCPRCHH ISVNNVLPVF DNLMQQKLVD KNIFSFYLNR DPEGQPGGEL    50
    MLGGTDSKYY HGELSYLNVT RKAYWQVHMD QLEVGNELTL CKGGCEAIVD 100
    TGTSLLVGPV EEVKELQKAI GAVPLIQGEY MIPCEKVSSL PTVYLKLGGK 150
    NYELHPDKYI LKVSQGGKTI CLSGFMGMDI PPPSGPLWIL GDVFIGSYYT 200
    VFDRDNNRVG FANAVVL 217
    Length:217
    Mass (Da):23,932
    Last modified:March 1, 2002 - v1
    Checksum:i7DD42BB90D830F7B
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC019682 mRNA. Translation: AAH19682.1.
    UniGeneiMm.231395.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC019682 mRNA. Translation: AAH19682.1 .
    UniGenei Mm.231395.

    3D structure databases

    ProteinModelPortali Q8VCK2.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q8VCK2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    MGIi MGI:88562. Ctsd.

    Phylogenomic databases

    HOVERGENi HBG000482.

    Miscellaneous databases

    ChiTaRSi CTSD. mouse.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori Q8VCK2.

    Family and domain databases

    Gene3Di 2.40.70.10. 1 hit.
    InterProi IPR001461. Aspartic_peptidase.
    IPR001969. Aspartic_peptidase_AS.
    IPR021109. Peptidase_aspartic_dom.
    [Graphical view ]
    PANTHERi PTHR13683. PTHR13683. 1 hit.
    Pfami PF00026. Asp. 1 hit.
    [Graphical view ]
    PRINTSi PR00792. PEPSIN.
    SUPFAMi SSF50630. SSF50630. 1 hit.
    PROSITEi PS00141. ASP_PROTEASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: EyeImported.

    Entry informationi

    Entry nameiQ8VCK2_MOUSE
    AccessioniPrimary (citable) accession number: Q8VCK2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2002
    Last sequence update: March 1, 2002
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)