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Q8VCK2 (Q8VCK2_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ctsd protein EMBL AAH19682.1
Gene names
Name:Ctsd EMBL AAH19682.1 MGI 88562
OrganismMus musculus (Mouse) EMBL AAH19682.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length217 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the peptidase A1 family. RuleBase RU000454

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH19682.1

Sequences

Sequence LengthMass (Da)Tools
Q8VCK2 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 7DD42BB90D830F7B

FASTA21723,932
        10         20         30         40         50         60 
EGSPCPRCHH ISVNNVLPVF DNLMQQKLVD KNIFSFYLNR DPEGQPGGEL MLGGTDSKYY 

        70         80         90        100        110        120 
HGELSYLNVT RKAYWQVHMD QLEVGNELTL CKGGCEAIVD TGTSLLVGPV EEVKELQKAI 

       130        140        150        160        170        180 
GAVPLIQGEY MIPCEKVSSL PTVYLKLGGK NYELHPDKYI LKVSQGGKTI CLSGFMGMDI 

       190        200        210 
PPPSGPLWIL GDVFIGSYYT VFDRDNNRVG FANAVVL

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Eye EMBL AAH19682.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC019682 mRNA. Translation: AAH19682.1.
IPIIPI00111013.
UniGeneMm.231395.

3D structure databases

HSSPHSSP built from PDB template 1LYB based on UniProtKB P07339.
ProteinModelPortalQ8VCK2.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8VCK2.

Proteomic databases

PRIDEQ8VCK2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:88562. Ctsd.

Phylogenomic databases

HOVERGENHBG000482.

Gene expression databases

ArrayExpressQ8VCK2.
GenevestigatorQ8VCK2.

Family and domain databases

Gene3D2.40.70.10. 1 hit.
InterProIPR001461. Peptidase_A1.
IPR021109. Peptidase_aspartic.
IPR001969. Peptidase_aspartic_AS.
[Graphical view]
PANTHERPTHR13683. PTHR13683. 1 hit.
PfamPF00026. Asp. 1 hit.
[Graphical view]
PRINTSPR00792. PEPSIN.
SUPFAMSSF50630. Pept_Aspartic. 1 hit.
PROSITEPS00141. ASP_PROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSCTSD. mouse.
SOURCESearch...

Entry information

Entry nameQ8VCK2_MOUSE
AccessionPrimary (citable) accession number: Q8VCK2
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: March 6, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info