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Protein

RNA-binding motif, single-stranded-interacting protein 2

Gene

Rbms2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
RNA-binding motif, single-stranded-interacting protein 2
Gene namesi
Name:Rbms2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 10

Organism-specific databases

MGIiMGI:1861776 Rbms2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000818011 – 383RNA-binding motif, single-stranded-interacting protein 2Add BLAST383

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineBy similarity1
Modified residuei108PhosphoserineBy similarity1
Modified residuei287PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQBiQ8VC70
PaxDbiQ8VC70
PeptideAtlasiQ8VC70
PRIDEiQ8VC70

PTM databases

iPTMnetiQ8VC70
PhosphoSitePlusiQ8VC70

Expressioni

Gene expression databases

BgeeiENSMUSG00000040043
ExpressionAtlasiQ8VC70 baseline and differential
GenevisibleiQ8VC70 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000089664

Structurei

3D structure databases

ProteinModelPortaliQ8VC70
SMRiQ8VC70
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 131RRM 1PROSITE-ProRule annotationAdd BLAST74
Domaini137 – 222RRM 2PROSITE-ProRule annotationAdd BLAST86

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG4733 Eukaryota
ENOG410XRB5 LUCA
GeneTreeiENSGT00760000118913
HOGENOMiHOG000008467
HOVERGENiHBG053108
InParanoidiQ8VC70
OMAiGHQMAPP
OrthoDBiEOG091G0FXS
PhylomeDBiQ8VC70
TreeFamiTF314644

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR002343 Hud_Sxl_RNA
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
PRINTSiPR00961 HUDSXLRNA
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

Q8VC70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLSVTSRPG ISTFGYNKNN KKLYVAQQMA PPSPRNSTPN SSGGGGGGSG
60 70 80 90 100
GNDQLSKTNL YIRGLQPGTT DQDLVKLCQP YGKIVSTKAI LDKTTNKCKG
110 120 130 140 150
YGFVDFDSPS SAQKAVTALK ASGVQAQMAK QQEQDPTNLY ISNLPLSMDE
160 170 180 190 200
QELEGMLKPF GQVISTRILR DTSGASRGVG FARMESTEKC EAIITHFNGK
210 220 230 240 250
YIKTPPGVAA PSDPLLCKFA DGGPKKRQSQ GRYVQNGRAW PRNGDMGGMA
260 270 280 290 300
LTYDPTAALQ NGFYAAPYSI AHSRMLAQSA LAPYLPSPVS SYQGSVLTPG
310 320 330 340 350
MDHPLSLQPA SMMGPLTQQL GHLSLNSLGT FMPAAAAMHG AYISQYPAVP
360 370 380
SSSVSAEESN GQQNQLAVEP PSDHGVYPFQ FSK
Length:383
Mass (Da):40,724
Last modified:March 1, 2002 - v1
Checksum:i2CD11874A92CEBEF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC021627 mRNA Translation: AAH21627.1
AK054482 mRNA Translation: BAC35797.1
CCDSiCCDS24261.1
RefSeqiNP_001034169.1, NM_001039080.1
NP_062685.2, NM_019711.2
XP_006513962.1, XM_006513899.2
XP_006513963.1, XM_006513900.2
UniGeneiMm.42247

Genome annotation databases

EnsembliENSMUST00000092033; ENSMUSP00000089664; ENSMUSG00000040043
GeneIDi56516
KEGGimmu:56516
UCSCiuc007hlm.1 mouse

Similar proteinsi

Entry informationi

Entry nameiRBMS2_MOUSE
AccessioniPrimary (citable) accession number: Q8VC70
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 23, 2004
Last sequence update: March 1, 2002
Last modified: March 28, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot

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