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Protein

Nucleoprotein

Gene

N

Organism
Dugbe virus (isolate ArD44313) (DUGV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Keywords - Ligandi

Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiDugbe virus (isolate ArD44313) (DUGV)
Taxonomic identifieri766194 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeNairovirus
Virus hostiAmblyomma variegatum (Tropical bont tick) [TaxID: 34610]
Homo sapiens (Human) [TaxID: 9606]
Hyalomma marginatum rufipes [TaxID: 72862]
Hyalomma truncatum [TaxID: 72855]
Rhipicephalus [TaxID: 34630]
Rhipicephalus annulatus [TaxID: 34611]
Rhipicephalus decoloratus [TaxID: 60189]
Rhipicephalus geigyi [TaxID: 136141]
ProteomesiUP000000278 Componenti: Genome

Subcellular locationi

  1. Virion

  2. Note: Internal protein of virus particle.

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 483483NucleoproteinPRO_0000395843Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR003486. Nairo_nucleocap.
[Graphical view]
PfamiPF02477. Nairo_nucleo. 1 hit.
[Graphical view]
PIRSFiPIRSF003950. N_NairoV. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8V336-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENQIKANNK KEFDEWFKPF SEKLQLRSNL TNSASLCDRV PDLALAEMKM
60 70 80 90 100
ALATDDKEKD SIFSNALVEA TRFCAPIYEC AWTCSTGVVQ KSLSWFDKNK
110 120 130 140 150
DFIKLWDAKY MDLKKGIPEP EQLVSYQQAA QKWRKDVGYE INQFTRSLTH
160 170 180 190 200
PVVAEYKVPG EIAVDVKEML SDMIRRRNVL LNGDGENAGK KGPISREHVS
210 220 230 240 250
WGRELAGGKF QVVFNPPWGD INKCGKSGIP LAATAMVKVA ELDGSKKLED
260 270 280 290 300
IRQALLDLKK WVEDNKDALE DGKGNELVQT MTKHLAQAVE LSKKSNALRA
310 320 330 340 350
QGAQIDTPFS AYYWAWSAGV KPETFFTLSQ FLFEMGQSAR GGKKMIKALT
360 370 380 390 400
STPLRWGKGL INLFADDDFL GNRLYMHPAV LTPGRMSEMG ACFGVIPVAS
410 420 430 440 450
PEDAILGSGH SKNILNFKID TSVQNPCAST IVQLYRIQKS GFDLESLEVV
460 470 480
STEHLLHQSF VGKRCPTQNA YKVRGNATNV NII
Length:483
Mass (Da):53,917
Last modified:March 1, 2002 - v1
Checksum:i09ED38AE453118C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF434161 Genomic RNA. Translation: AAL73396.1.
RefSeqiNP_690574.1. NC_004157.1.

Genome annotation databases

GeneIDi956564.
KEGGivg:956564.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF434161 Genomic RNA. Translation: AAL73396.1.
RefSeqiNP_690574.1. NC_004157.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi956564.
KEGGivg:956564.

Family and domain databases

InterProiIPR003486. Nairo_nucleocap.
[Graphical view]
PfamiPF02477. Nairo_nucleo. 1 hit.
[Graphical view]
PIRSFiPIRSF003950. N_NairoV. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Dugbe nairovirus S segment: correction of published sequence and comparison of five isolates."
    Bridgen A., Dalrymple D.A., Elliott R.M.
    Virology 294:364-371(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_DUGBA
AccessioniPrimary (citable) accession number: Q8V336
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 13, 2010
Last sequence update: March 1, 2002
Last modified: April 1, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.