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Q8UYL3 (Q8UYL3_9POXV) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL AHB23632.1
Gene names
Name:crmE EMBL CAC83048.1
ORF Names:List195 EMBL ABD52700.1, m8259R EMBL AAW23648.1, mO259R EMBL AAW23930.1, W86/88-1-195 EMBL AHB23632.1
OrganismVaccinia virus EMBL CAC83048.1
Taxonomic identifier10245 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirus

Protein attributes

Sequence length167 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 2UWI
Gene Ontology (GO)
None. [Check GOA]

Binary interactions

With

Entry

#Exp.

IntAct

Notes

TNFP013753EBI-7539950,EBI-359977From a different organism.

Sequences

Sequence LengthMass (Da)Tools
Q8UYL3 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 3B4A0D4A27FB797D

FASTA16718,510
        10         20         30         40         50         60 
MTKVIIILGF LIINTNSLSM KCEQGVSYYN SQELKCCKLC KPGTYSDHRC DKYSDTICGH 

        70         80         90        100        110        120 
CPSDTFTSIY NRSPWCHSCR GPCGTNRVEV TPCTPTTNRI CHCDSNSYCL LKASDGNCVT 

       130        140        150        160 
CAPKTKCGRG YGKKGEDEMG NTICKKCRKG TYSDIVSDSD QCKPMTR 

« Hide

References

[1]"Vaccinia virus CrmE encodes a soluble and cell surface tumor necrosis factor receptor that contributes to virus virulence."
Reading P.C., Khanna A., Smith G.L.
Virology 292:285-298(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USSR EMBL CAC83048.1.
[2]"An attenuated LC16m8 smallpox vaccine: analysis of full-genome sequence and induction of immune protection."
Morikawa S., Sakiyama T., Hasegawa H., Saijo M., Maeda A., Kurane I., Maeno G., Kimura J., Hirama C., Yoshida T., Asahi-Ozaki Y., Sata T., Kurata T., Kojima A.
J. Virol. 79:11873-11891(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: LC16m8 EMBL AAW23648.1 and LC16mO EMBL AAW23930.1.
[3]"Genomic sequence of a clonal isolate of the vaccinia virus Lister strain employed for smallpox vaccination in France and its comparison to other orthopoxviruses."
Garcel A., Crance J.M., Drillien R., Garin D., Favier A.L.
J. Gen. Virol. 88:1906-1916(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Lister EMBL ABD52700.1.
[4]"Structure of CrmE, a virus-encoded tumour necrosis factor receptor."
Graham S.C., Bahar M.W., Abrescia N.G., Smith G.L., Stuart D.I., Grimes J.M.
J. Mol. Biol. 372:660-671(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 22-153.
[5]"Genome Sequence of WAU86/88-1, a New Variant of Vaccinia Virus Lister Strain from Poland."
Mavian C., Lopez-Bueno A., Alcami A.
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: WAU86/88-1 EMBL AHB23632.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY678275 Genomic DNA. Translation: AAW23648.1.
AY678277 Genomic DNA. Translation: AAW23930.1.
DQ121394 Genomic DNA. Translation: ABD52700.1.
KF866253 Genomic DNA. Translation: AHB23632.1.
AJ315962 Genomic DNA. Translation: CAC83048.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2UWIX-ray2.00A/B22-153[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

MINTMINT-6740381.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR001368. TNFR/NGFR_Cys_rich_reg.
[Graphical view]
PfamPF00020. TNFR_c6. 1 hit.
[Graphical view]
SMARTSM00208. TNFR. 3 hits.
[Graphical view]
PROSITEPS00652. TNFR_NGFR_1. 2 hits.
PS50050. TNFR_NGFR_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ8UYL3.

Entry information

Entry nameQ8UYL3_9POXV
AccessionPrimary (citable) accession number: Q8UYL3
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: February 19, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)