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Protein

Replication-associated protein

Gene

repA

Organism
Wheat dwarf virus - [Enkoping1]
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Replication-associated proteinUniRule annotation (EC:3.1.21.-UniRule annotation)
Short name:
RepUniRule annotation
Gene namesi
Name:repAImported
OrganismiWheat dwarf virus - [Enkoping1]Imported
Taxonomic identifieri290587 [NCBI]
Taxonomic lineageiVirusesssDNA virusesGeminiviridaeMastrevirus

Subcellular locationi

  • Host nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Host nucleusUniRule annotation

Interactioni

Subunit structurei

Homooligomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ8UYK9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 123Gemini_AL1InterPro annotationAdd BLAST115
Domaini133 – 233Gemini_AL1_MInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the geminiviridae Rep protein family.UniRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
PfamiView protein in Pfam
PF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.

Sequencei

Sequence statusi: Complete.

Q8UYK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSSAPRFR VYSKYLFLTY PQCTLEPQYA LDSLRTLLNK YEPLYIAAVR
60 70 80 90 100
ELHEDGSPHL HVLVQNKLRA SITNPNALNL RMDTSPFSIF HPNIQAAKDC
110 120 130 140 150
NQVRDYITKE VDSDANTAEW GTFVAVSTPG RKDRDADMKQ IIESSSSREE
160 170 180 190 200
FLSMVCNRFP FEWSIRLKDF EYTARHLFPD PVATYTPEFP TESLICHETI
210 220 230 240 250
ESWKNEHLYS VSLESYIICT STPADQAQSD LEWMDDYSRS HRGGISPSTS
260
AGQPEQERLP GQGL
Length:264
Mass (Da):30,128
Last modified:March 1, 2002 - v1
Checksum:i568D15EC21E29A9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ311031 Genomic DNA. Translation: CAC84661.1.
RefSeqiNP_542350.1. NC_003326.1.

Genome annotation databases

GeneIDi929290.
KEGGivg:929290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ311031 Genomic DNA. Translation: CAC84661.1.
RefSeqiNP_542350.1. NC_003326.1.

3D structure databases

ProteinModelPortaliQ8UYK9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi929290.
KEGGivg:929290.

Family and domain databases

InterProiView protein in InterPro
IPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
PfamiView protein in Pfam
PF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8UYK9_9GEMI
AccessioniPrimary (citable) accession number: Q8UYK9
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: June 7, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.