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Protein

Glycogen synthase 2

Gene

glgA2

Organism
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.By similarity

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).

Pathway:iglycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 2 (EC:2.4.1.21)
Alternative name(s):
Starch [bacterial glycogen] synthase 2
Gene namesi
Name:glgA2
Ordered Locus Names:Atu5285
ORF Names:AGR_pAT_410
Encoded oniPlasmid AT0 Publication
OrganismiAgrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
ProteomesiUP000000813 Componenti: Plasmid At

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 509509Glycogen synthase 2PRO_0000188585Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ8UK38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiLLNAMRC.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8UK38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRILAVTAEM FPFVKTGGLA DATSALPQAL ERKGADVRTL LPLYRGLTPL
60 70 80 90 100
VRGRKPVLVA NILEQPVSVY YVVSDGHKLL LLEAASLFDR DGHPYGVKGE
110 120 130 140 150
PFADNDLRFA VLSKVAAEIA LGAIDGWQPD VVHVHDWHAA LTCVYLADST
160 170 180 190 200
PSVASVLTLH NLAFQGQYPL ERAGMLGLPS HLCTVDCLEY YDDMSFLKGG
210 220 230 240 250
LTTASAVTTV SPTYAREILT PEMGMGMHGV LARRRGDLRG IVNGVDHDVW
260 270 280 290 300
NPATDPYILA NFTAATATRR SLNKYALLQA LGLAPTQGPV FGVVSRLTWQ
310 320 330 340 350
KGIDLLPHVV PLIIERKGRL IVHGEGDTAL EDSLQALAKR YPELVCAHIG
360 370 380 390 400
YDERLAHMIQ AGSDFIIQPS RFEPCGLTQL YALRYGALPI VSRTGGLAET
410 420 430 440 450
IIDANDAAIE AGVATGFQFE PANEDDLRAA LERAISAYND RELFRRLQTQ
460 470 480 490 500
AMQANFSWDK SAAQYMALFE SLVGNSTRET DAVADIRTET FAKIRADRRL

AGTPGSPTG
Length:509
Mass (Da):55,309
Last modified:October 19, 2002 - v2
Checksum:iE2D12821F286FA53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007872 Genomic DNA. Translation: AAK90661.1.
PIRiAH3194.
RefSeqiNP_396220.1. NC_003064.2.
WP_010974543.1. NC_003064.2.

Genome annotation databases

EnsemblBacteriaiAAK90661; AAK90661; Atu5285.
GeneIDi1137058.
KEGGiatu:Atu5285.
PATRICi20819731. VBIAgrTum91616_4960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007872 Genomic DNA. Translation: AAK90661.1.
PIRiAH3194.
RefSeqiNP_396220.1. NC_003064.2.
WP_010974543.1. NC_003064.2.

3D structure databases

ProteinModelPortaliQ8UK38.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK90661; AAK90661; Atu5285.
GeneIDi1137058.
KEGGiatu:Atu5285.
PATRICi20819731. VBIAgrTum91616_4960.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiLLNAMRC.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970.

Entry informationi

Entry nameiGLGA2_AGRFC
AccessioniPrimary (citable) accession number: Q8UK38
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 19, 2002
Last sequence update: October 19, 2002
Last modified: July 22, 2015
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.