Reviewed, UniProtKB/Swiss-Prot Q8UIF1 (GLND_AGRT5)

Names and origin

Protein names

Recommended name:
    [Protein-PII] uridylyltransferase
      Short name=PII uridylyl-transferase
    EC=2.7.7.59
Alternative name(s):
    Uridylyl-removing enzyme
    UTase

Gene names

Name:	glnD
Ordered Locus Names:	Atu0346
ORF Names:	AGR_C_606

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970) [Complete proteome] [HAMAP]

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	942 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein By similarity.
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP MF_00277
Sequence similarities	Belongs to the glnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 942	942	[Protein-PII] uridylyltransferase HAMAP MF_00277		PRO_0000192714

Sequences

	Sequence		Length	Mass (Da)
	Q8UIF1-1 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: B0EBDF337C7CE945	FASTA	942	106,204
	10 20 30 40 50 60 MAIKDLDFSD ILDVSALKRD CDVIFKEDSK RIADIKSDLL PIFRRASTEG REKARELLKA 70 80 90 100 110 120 DGSGIDCARR ISWLQDRLIE TLYDLACQHV YPKDAPQIAV AAVGGYGRGT LAPGSDIDLL 130 140 150 160 170 180 FLLPAKNTPD MHKAVEFVLY LLWDLGFKVG HATRTVDECI RLSKSDMTIR TAILEVRAIC 190 200 210 220 230 240 GRKSLTDDLE KRFESEVVTG TGPEFIAAKL AERDQRHRKA GDTRYLVEPN VKEGKGGLRD 250 260 270 280 290 300 LHTLFWIAKY YYHVRDTADL VKLGVLSRSE LKLFEKADDF LWAVRCQMHF ITGKAEERLS 310 320 330 340 350 360 FDIQREIADA LNYQPRPGLS AVERFMKHYF LVAKDVGDLT RIVCAALEDR QAKDVPGLSG 370 380 390 400 410 420 VLSRFAHRVR KIPGSVEFVE DRGRIALARP DVFKNDPVNL IRLFHIADIN NLELHPDALR 430 440 450 460 470 480 VVTRSLSLIN DELRENEEAN RLFLSILTSR RDPALTLRRM NEAGVLGKFI PEFGKIVAMM 490 500 510 520 530 540 QFNMYHHYTV DEHLIRSVGV LSEVDKGTAV DAHPLANQLM PGVEEREALY VAVLLHDVAK 550 560 570 580 590 600 GRQEDHSIAG ARVARKLCQR FRLTGKQTET VVWLIEQHLL MSMVAQTRDL HDRKTITDFA 610 620 630 640 650 660 DKVQSMERLK MLLILTVCDI RAVGPGVWNG WKGQLLRSLY YETELLLSGG FSEVSRKERA 670 680 690 700 710 720 QIARQALYDA LEDWGQKARR KYTKLHYEPY LLTVALEDQV RHTRFMREAD KQEKALSTMV 730 740 750 760 770 780 RTHSFHAITE ITVLAPDHPR LLSIITGACA AAGANIADAQ IFTTSDGRAL DTILINREFP 790 800 810 820 830 840 IDEDETRRGA NVGKLIEEVL SGKQRLPEMI ATRTKSRRKK SAFTIPPSVT ISNGLSNKFT 850 860 870 880 890 900 VIEVECLDRP GLLADMTAVI ADLSLDIHSA RITTFGEKVI DTFYVTDLFG QKVTNDNRQA 910 920 930 940 SIAQRLKAVM SEQEDELRDR MPNGIIAHPD VAALPAARTA KA

References

[1]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed: 11743193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed: 11743194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE007869 Genomic DNA. Translation: AAK86163.2.
PIR	AB2619. B97401.
RefSeq	NP_353378.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q8UIF1.
Genome annotation databases
GeneID	1132384.
GenomeReviews	Gene locus Atu0346 in contig AE007869_GR.
KEGG	atc:AGR_C_606. atu:Atu0346.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q8UIF1.
Family and domain databases
HAMAP	MF_00277. [Tree]
InterPro	IPR002912. ACT_bd. IPR010043. GlnD_Uridyltrans. IPR003607. Met-dep_phosphohydro_HD. IPR006674. Met-dep_phosphohydro_HD_sub. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. GlnD_Uridyltrans. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_AGRT5

Accession

Primary (citable) accession number: Q8UIF1

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 13, 2002
Last sequence update:	June 1, 2002
Last modified:	September 1, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)