[Protein-PII] uridylyltransferase - Agrobacterium tumefaciens (strain C58 / ATCC 33970)

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Q8UIF1 (GLND_AGRT5) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 70. History...

Clusters with 100%, 90%, 50% identity |

Documents (1) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	Atu0346
ORF Names:	AGR_C_606

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970) [Reference proteome] [HAMAP]

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium tumefaciens complex ›

Protein attributes

Sequence length	942 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 942

942

[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277

PRO_0000192714

Sequences

Sequence

Length

Mass (Da)

Tools

Q8UIF1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: B0EBDF337C7CE945
Show »

FASTA

942

106,204

        10         20         30         40         50         60 
MAIKDLDFSD ILDVSALKRD CDVIFKEDSK RIADIKSDLL PIFRRASTEG REKARELLKA 

        70         80         90        100        110        120 
DGSGIDCARR ISWLQDRLIE TLYDLACQHV YPKDAPQIAV AAVGGYGRGT LAPGSDIDLL 

       130        140        150        160        170        180 
FLLPAKNTPD MHKAVEFVLY LLWDLGFKVG HATRTVDECI RLSKSDMTIR TAILEVRAIC 

       190        200        210        220        230        240 
GRKSLTDDLE KRFESEVVTG TGPEFIAAKL AERDQRHRKA GDTRYLVEPN VKEGKGGLRD 

       250        260        270        280        290        300 
LHTLFWIAKY YYHVRDTADL VKLGVLSRSE LKLFEKADDF LWAVRCQMHF ITGKAEERLS 

       310        320        330        340        350        360 
FDIQREIADA LNYQPRPGLS AVERFMKHYF LVAKDVGDLT RIVCAALEDR QAKDVPGLSG 

       370        380        390        400        410        420 
VLSRFAHRVR KIPGSVEFVE DRGRIALARP DVFKNDPVNL IRLFHIADIN NLELHPDALR 

       430        440        450        460        470        480 
VVTRSLSLIN DELRENEEAN RLFLSILTSR RDPALTLRRM NEAGVLGKFI PEFGKIVAMM 

       490        500        510        520        530        540 
QFNMYHHYTV DEHLIRSVGV LSEVDKGTAV DAHPLANQLM PGVEEREALY VAVLLHDVAK 

       550        560        570        580        590        600 
GRQEDHSIAG ARVARKLCQR FRLTGKQTET VVWLIEQHLL MSMVAQTRDL HDRKTITDFA 

       610        620        630        640        650        660 
DKVQSMERLK MLLILTVCDI RAVGPGVWNG WKGQLLRSLY YETELLLSGG FSEVSRKERA 

       670        680        690        700        710        720 
QIARQALYDA LEDWGQKARR KYTKLHYEPY LLTVALEDQV RHTRFMREAD KQEKALSTMV 

       730        740        750        760        770        780 
RTHSFHAITE ITVLAPDHPR LLSIITGACA AAGANIADAQ IFTTSDGRAL DTILINREFP 

       790        800        810        820        830        840 
IDEDETRRGA NVGKLIEEVL SGKQRLPEMI ATRTKSRRKK SAFTIPPSVT ISNGLSNKFT 

       850        860        870        880        890        900 
VIEVECLDRP GLLADMTAVI ADLSLDIHSA RITTFGEKVI DTFYVTDLFG QKVTNDNRQA 

       910        920        930        940 
SIAQRLKAVM SEQEDELRDR MPNGIIAHPD VAALPAARTA KA

« Hide

References

[1]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58."
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J.

Nester E.W.
Science 294:2317-2323(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C58 / ATCC 33970.

[2]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58."
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C.

Slater S.
Science 294:2323-2328(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C58 / ATCC 33970.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007869 Genomic DNA. Translation: AAK86163.2.
PIR	AB2619. B97401.
RefSeq	NP_353378.2. NC_003062.2.
3D structure databases
ProteinModelPortal	Q8UIF1.
ModBase	Search...
Protein-protein interaction databases
STRING	176299.Atu0346.
Proteomic databases
PRIDE	Q8UIF1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1132384.
KEGG	atu:Atu0346.
PATRIC	20810375. VBIAgrTum91616_0337.
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261779.
KO	K00990.
OMA	SPKVWNA.
ProtClustDB	PRK05092.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_AGRT5

Accession

Primary (citable) accession number: Q8UIF1

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 13, 2002
Last sequence update:	June 1, 2002
Last modified:	May 1, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information

Relevant documents