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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi11 – 166FADUniRule annotation
Nucleotide bindingi270 – 28415NADUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Enzyme and pathway databases

BioCyciAGRO:ATU2831-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:Atu2831
ORF Names:AGR_C_5134
OrganismiAgrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
Proteomesi
  • UP000000813 Componenti: Chromosome circular

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 627627tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_0000117043Add
BLAST

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi176299.Atu2831.

Structurei

3D structure databases

ProteinModelPortaliQ8UBM0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OrthoDBiEOG6W9X6J.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8UBM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHQSFDVVVI GGGHAGSEAA AAAARHGAKT ALVTHKREAI GVMSCNPAIG
60 70 80 90 100
GLGKGHLVRE IDALDGLMGR VADAAGIQFR MLNRKKGPAV RGPRTQADRR
110 120 130 140 150
LYREAMQREI DAMDNLTIIE GDAFDIEMDN DRVAAVIMKN GSRIPCGAVV
160 170 180 190 200
LTSGTFLRGL IHIGSEKIPA GRVGEMPSLG LSDTLSRLGL AMGRLKTGTP
210 220 230 240 250
ARLDGRTIDW NAVDRQAADE DPVPFSFMTD HILNPQIECG VTRTTPASHK
260 270 280 290 300
IIQDNIHLSA MYSGQIEGVG PRYCPSIEDK ITRFGERDGH QIFLEPEGLD
310 320 330 340 350
DYTIYPNGIS TSLPAFVQEQ FIRTIPGLEQ VTILQPGYAI EYDYVDPREL
360 370 380 390 400
KPSLECRKIP GLFLAGQING TTGYEEAGAQ GLVAGLNASL YAGSADPLHF
410 420 430 440 450
SRTESYIGVM IDDLTSKGVS EPYRMFTSRA EYRLSLRVDN ADLRLTPVAQ
460 470 480 490 500
KAGILGRERQ QRFTDFLSDL DSVRALMKEL SISPSQAAKQ GLKLNQDGQR
510 520 530 540 550
RSVYELLAYP DMTLQALAEH WPELNRLNAK VAEVLQIEAS YAVYMQRQSA
560 570 580 590 600
DIVDIKRDED RKIPDDFDFQ SLSGLSNELK QKLEKARPEN IAQAARVDGM
610 620
TPAAISLLLA LLRKGTATRS EQLRMHQ
Length:627
Mass (Da):68,766
Last modified:June 1, 2002 - v1
Checksum:iD92E49B63BE836DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007869 Genomic DNA. Translation: AAK88542.1.
PIRiAF2924.
E97698.
RefSeqiNP_355757.1. NC_003062.2.
WP_010972598.1. NC_003062.2.

Genome annotation databases

EnsemblBacteriaiAAK88542; AAK88542; Atu2831.
GeneIDi1134869.
KEGGiatu:Atu2831.
PATRICi20815455. VBIAgrTum91616_2840.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007869 Genomic DNA. Translation: AAK88542.1.
PIRiAF2924.
E97698.
RefSeqiNP_355757.1. NC_003062.2.
WP_010972598.1. NC_003062.2.

3D structure databases

ProteinModelPortaliQ8UBM0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi176299.Atu2831.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK88542; AAK88542; Atu2831.
GeneIDi1134869.
KEGGiatu:Atu2831.
PATRICi20815455. VBIAgrTum91616_2840.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OrthoDBiEOG6W9X6J.

Enzyme and pathway databases

BioCyciAGRO:ATU2831-MONOMER.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970.

Entry informationi

Entry nameiMNMG_AGRFC
AccessioniPrimary (citable) accession number: Q8UBM0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 2, 2002
Last sequence update: June 1, 2002
Last modified: January 20, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.