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Protein
Submitted name:

NOP5/NOP56 related protein

Gene

PF0060

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi348Iron-sulfur (4Fe-4S-S-AdoMet)Combined sources1
Metal bindingi349Iron-sulfur (4Fe-4S-S-AdoMet); via amide nitrogen and carbonyl oxygenCombined sources1

GO - Molecular functioni

Keywordsi

Ligand4Fe-4SCombined sources, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
NOP5/NOP56 related proteinImported
Gene namesi
Ordered Locus Names:PF0060Imported
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)Imported
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ8U4M1.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
Q8U4M27EBI-16078570,EBI-16078587

Protein-protein interaction databases

DIPiDIP-60605N.
IntActiQ8U4M1. 1 interactor.
STRINGi186497.PF0060.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NNWX-ray2.70A/C1-366[»]
3NMUX-ray2.73A/B1-369[»]
3NVIX-ray2.71A/C1-369[»]
3NVKX-ray3.21A/F1-363[»]
3NVMX-ray3.41A1-369[»]
4BY9NMR-C/F/I/L4-369[»]
ProteinModelPortaliQ8U4M1.
SMRiQ8U4M1.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8U4M1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini252 – 367NopInterPro annotationAdd BLAST116

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili224 – 247Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiarCOG01923. Archaea.
COG1498. LUCA.
HOGENOMiHOG000227188.
KOiK14564.
OMAiREWYSLH.
OrthoDBiPOG093Z0ANU.

Family and domain databases

InterProiView protein in InterPro
IPR002687. Nop_dom.
IPR036070. Nop_dom_sf.
IPR012976. NOSIC.
PfamiView protein in Pfam
PF01798. Nop. 1 hit.
SMARTiView protein in SMART
SM00931. NOSIC. 1 hit.
SUPFAMiSSF89124. SSF89124. 1 hit.
PROSITEiView protein in PROSITE
PS51358. NOP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8U4M1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFISENVR GIYAFDENGN LIEKRYFTDK PEKVLDQLLK GEITKDLEEL
60 70 80 90 100
LNSLKEKGYD EFVFEHPELS RRAKELGFSA TTEFPNIAGE RLRSNPEEFL
110 120 130 140 150
GENWFEEYYK VGVALTRMRI QEQSGARDKM VIQAIEALDD VDKVINLLVA
160 170 180 190 200
RLREWYSLHF PELDELLPKH PQYVAFVKTV GHRDNINEEV LRELGLSEEK
210 220 230 240 250
IKKILEAKEK TMGAWMDQTD IEVVRQLAEE IDRLYQLRKK LEDYIDRAMD
260 270 280 290 300
DVAPNLKALV GAKLAARLIS LAGGLRELAM MPSSTIQVLG AEKALFRHLR
310 320 330 340 350
TGAKPPKHGV IYQYPAINRS PWWQRGKIAR ALAGKLAIAA RVDYFSGEYI
360 370 380 390 400
AEELKKELEA RIREIKEKYP KPPKRKREER KGKKPWKKDK KKKKKKEKPR

RR
Length:402
Mass (Da):46,788
Last modified:June 1, 2002 - v1
Checksum:i898FA9AA195CD911
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL80184.1.
RefSeqiWP_011011172.1. NC_003413.1.

Genome annotation databases

EnsemblBacteriaiAAL80184; AAL80184; PF0060.
GeneIDi1467889.
KEGGipfu:PF0060.
PATRICifig|186497.12.peg.64.

Similar proteinsi

Entry informationi

Entry nameiQ8U4M1_PYRFU
AccessioniPrimary (citable) accession number: Q8U4M1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: October 25, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported