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Protein
Submitted name:

Putative HTH transcription regulator

Gene

PF0340

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative HTH transcription regulatorImported
Gene namesi
Ordered Locus Names:PF0340Imported
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)Imported
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
ProteomesiUP000001013 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ8U3W1.

Interactioni

Protein-protein interaction databases

STRINGi186497.PF0340.

Structurei

3D structure databases

ProteinModelPortaliQ8U3W1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3373.
HOGENOMiHOG000254439.
KOiK09745.
OMAiYYRLTEY.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR010863. DUF1495.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07381. DUF1495. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8U3W1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPIIDPHIL RSLHRSELRR RILHYLYEIY PSATYLSEIA RVVSSDPSNV
60 70 80 90 100
RGALVGLGNR YNSESSLVYL GLVEEIVNNG FKYYRLTEYG KKVVEMLKDY

QTYYRKFM
Length:108
Mass (Da):12,726
Last modified:June 1, 2002 - v1
Checksum:iA6110A06F961F8D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL80464.1.
RefSeqiNP_578069.1. NC_003413.1.
WP_011011455.1. NC_003413.1.

Genome annotation databases

EnsemblBacteriaiAAL80464; AAL80464; PF0340.
GeneIDi1468175.
KEGGipfu:PF0340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL80464.1.
RefSeqiNP_578069.1. NC_003413.1.
WP_011011455.1. NC_003413.1.

3D structure databases

ProteinModelPortaliQ8U3W1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi186497.PF0340.

Proteomic databases

PRIDEiQ8U3W1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL80464; AAL80464; PF0340.
GeneIDi1468175.
KEGGipfu:PF0340.

Phylogenomic databases

eggNOGiCOG3373.
HOGENOMiHOG000254439.
KOiK09745.
OMAiYYRLTEY.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR010863. DUF1495.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07381. DUF1495. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences."
    Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M., DiRuggiero J., Robb F.T.
    Genetics 152:1299-1305(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43587 / DSM 3638 / JCM 8422 / Vc1Imported.

Entry informationi

Entry nameiQ8U3W1_PYRFU
AccessioniPrimary (citable) accession number: Q8U3W1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: April 1, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.