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Q8U3I8 (Q8U3I8_PYRFU) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-amylase EMBL AAL80602.1
Gene names
Ordered Locus Names:PF0478
OrganismPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifier186497 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length690 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8U3I8 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 5389CA4DF66E0AAA

FASTA69079,175
        10         20         30         40         50         60 
MVDRFYDRNP TNNEPFYDPE KKNYRLYWGG DIEGIIERLD YIESLGVSMI WLSPLNDNIN 

        70         80         90        100        110        120 
RMAGGSAPYH GYWPRDFKRI DEHFGTWEDF RRLVEEAKKR GICIIVDYVP NHSNPATDGE 

       130        140        150        160        170        180 
FGALYDNGTL VTNYYEDRKN ATRNPYTASL ENIYHHNGNI NDWFGFQLKY ANLFGLADFN 

       190        200        210        220        230        240 
QMNDFVDNYL KEGAALFVKN GACGFRIDAV KHIELGWLET FYLYLYQISD EPLFIYGEYF 

       250        260        270        280        290        300 
ANTPDKTFDL YEFYRYSNVS SLLNIPIRES IARTFAYGGS FEQLAKMLEE YYSLFVYPNK 

       310        320        330        340        350        360 
QLNFLDSHDL VRFLNMNPNK DRYHMALGLV MTLPGIPVIY YGDESYLVSK EGKGDPYNRP 

       370        380        390        400        410        420 
MMVFDNSTKA AEIIRKLSLL RKVNDALAYS DFRTVYVDYN TWIFERKFGS HKILVALNKG 

       430        440        450        460        470        480 
PDKNITISLN WTDGTYIDII EGAILKVKEG QGEIKLPRYS FYVFHVEEEQ KTPLIGSITP 

       490        500        510        520        530        540 
YIAQPGQKIL IAGAGLNGNI KVYIGGRRAR IIEKEENSIL VEVPEIKTMN AWIPVWVVVN 

       550        560        570        580        590        600 
GTRSNEVKLR YYSSNDIPAL IVLQGNYTGY LWVKGNIPEL SEPRPLLKSP TGHYFAVVPL 

       610        620        630        640        650        660 
PRNKTFTVQL YKGLPWEPLQ PTNVTLYGIG NKTVILNEAA PETPVCGPGI VAVFALLPLL 

       670        680        690 
KRKKKKSPNT TITPYGVPIV AVSWIVRWCL

« Hide

References

[1]"Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences."
Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M., DiRuggiero J., Robb F.T.
Genetics 152:1299-1305(1999) [PubMed: 10430560] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43587 / DSM 3638 / JCM 8422 / Vc1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE009950 Genomic DNA. Translation: AAL80602.1.
RefSeqNP_578207.1. NC_003413.1.

3D structure databases

HSSPHSSP built from PDB template 1QHP based on UniProtKB P19531.
ProteinModelPortalQ8U3I8.
ModBaseSearch...

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBPYRT00000005058; EBPYRP00000004919; EBPYRG00000005057.
GeneID1468319.
GenomeReviewsGene locus PF0478 in contig AE009950_GR.
KEGGpfu:PF0478.

Phylogenomic databases

GeneTreeEBGT00050000023437.
HOGENOMHBG726713.
OMAHTSTAEY.
PhylomeDBQ8U3I8.
ProtClustDBCLSK568335.

Family and domain databases

InterProIPR006048. A-amylase_b_C.
IPR015902. Alpha_amylase.
IPR006046. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002909. IPT_TIG_rcpt.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF01833. TIG. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8U3I8_PYRFU
AccessionPrimary (citable) accession number: Q8U3I8
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: January 25, 2012
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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