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Protein

30S ribosomal protein S9

Gene

rps9

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S9UniRule annotation
Alternative name(s):
Small ribosomal subunit protein uS9
Gene namesi
Name:rps9UniRule annotation
Ordered Locus Names:PF1644
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001114711 – 13530S ribosomal protein S9Add BLAST135

Proteomic databases

PRIDEiQ8U0E7.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.1 Publication

Protein-protein interaction databases

STRINGi186497.PF1644.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4Nelectron microscopy9.00K1-135[»]
4V6Uelectron microscopy6.60AK1-135[»]
5JB3electron microscopy5.34K1-135[»]
5JBHelectron microscopy5.34K1-135[»]
ProteinModelPortaliQ8U0E7.
SMRiQ8U0E7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS9 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04243. Archaea.
COG0103. LUCA.
HOGENOMiHOG000019803.
KOiK02996.
OMAiHVSQIYA.
OrthoDBiPOG093Z0EW5.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
HAMAPiMF_00532_A. Ribosomal_S9_A. 1 hit.
InterProiView protein in InterPro
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000754. Ribosomal_S9.
IPR019958. Ribosomal_S9_archaeal.
IPR020574. Ribosomal_S9_CS.
PANTHERiPTHR21569. PTHR21569. 1 hit.
PfamiView protein in Pfam
PF00380. Ribosomal_S9. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR03627. uS9_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00360. RIBOSOMAL_S9. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8U0E7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIIQTTGKR KTAIARAVIR EGKGRVRING KPVEIIEPEI ARFTILEPLI
60 70 80 90 100
LAGEEIWNSV DIDVKVEGGG FMGQAEAARM AIARALVEWT GDMSLKEKFM
110 120 130
KYDRTMLVGD PRRTEPHKPN RSTKGPRAKR QKSYR
Length:135
Mass (Da):15,289
Last modified:June 1, 2002 - v1
Checksum:iFF911BE285A1754C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL81768.1.
RefSeqiWP_011012791.1. NC_003413.1.

Genome annotation databases

EnsemblBacteriaiAAL81768; AAL81768; PF1644.
GeneIDi1469521.
KEGGipfu:PF1644.
PATRICifig|186497.12.peg.1710.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS9_PYRFU
AccessioniPrimary (citable) accession number: Q8U0E7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 2, 2002
Last sequence update: June 1, 2002
Last modified: June 7, 2017
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families