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Protein
Submitted name:

Small nucleolar rnp gar1-like protein

Gene

PF1791

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Small nucleolar rnp gar1-like proteinImported
Gene namesi
Ordered Locus Names:PF1791Imported
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)Imported
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ8U029.

Interactioni

Protein-protein interaction databases

DIPiDIP-60413N.
STRINGi186497.PF1791.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2EY4X-ray2.11C/D1-82[»]
2HVYX-ray2.30B1-104[»]
2RFKX-ray2.87C8-81[»]
3HAYX-ray4.99B1-104[»]
3MQKX-ray2.80C8-82[»]
ProteinModelPortaliQ8U029.
SMRiQ8U029. Positions 8-82.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8U029.

Family & Domainsi

Phylogenomic databases

eggNOGiarCOG02466. Archaea.
COG3277. LUCA.
HOGENOMiHOG000224168.
KOiK07569.
OMAiFLIVRTN.

Family and domain databases

InterProiIPR007504. H/ACA_rnp_Gar1/Naf1.
IPR020321. H/ACA_rnp_Gar1_arc.
IPR009000. Transl_B-barrel.
[Graphical view]
PfamiPF04410. Gar1. 1 hit.
[Graphical view]
ProDomiPD064583. UPF_MJ0782.1/MTH886. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50447. SSF50447. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8U029-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKQGEKMKR LGKVLHYAKQ GFLIVRTNWV PSLNDRVVDK RLQFVGIVKD
60 70 80 90 100
VFGPVKMPYV AIKPKVSNPE IYVGEVLYVD ERKRKESPKK NKEKRMKKKK

RLNR
Length:104
Mass (Da):12,311
Last modified:June 1, 2002 - v1
Checksum:iEF0A25A67B14687C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL81915.1.

Genome annotation databases

EnsemblBacteriaiAAL81915; AAL81915; PF1791.
KEGGipfu:PF1791.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL81915.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2EY4X-ray2.11C/D1-82[»]
2HVYX-ray2.30B1-104[»]
2RFKX-ray2.87C8-81[»]
3HAYX-ray4.99B1-104[»]
3MQKX-ray2.80C8-82[»]
ProteinModelPortaliQ8U029.
SMRiQ8U029. Positions 8-82.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60413N.
STRINGi186497.PF1791.

Proteomic databases

PRIDEiQ8U029.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL81915; AAL81915; PF1791.
KEGGipfu:PF1791.

Phylogenomic databases

eggNOGiarCOG02466. Archaea.
COG3277. LUCA.
HOGENOMiHOG000224168.
KOiK07569.
OMAiFLIVRTN.

Miscellaneous databases

EvolutionaryTraceiQ8U029.

Family and domain databases

InterProiIPR007504. H/ACA_rnp_Gar1/Naf1.
IPR020321. H/ACA_rnp_Gar1_arc.
IPR009000. Transl_B-barrel.
[Graphical view]
PfamiPF04410. Gar1. 1 hit.
[Graphical view]
ProDomiPD064583. UPF_MJ0782.1/MTH886. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50447. SSF50447. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ8U029_PYRFU
AccessioniPrimary (citable) accession number: Q8U029
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: December 9, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.