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Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4eUniRule annotation
Alternative name(s):
Small ribosomal subunit protein eS4
Gene namesi
Name:rps4eUniRule annotation
Ordered Locus Names:PF1812
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001308591 – 24330S ribosomal protein S4eAdd BLAST243

Proteomic databases

PRIDEiQ8U011

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.1 Publication

Protein-protein interaction databases

STRINGi186497.PF1812

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V6Uelectron microscopy6.60AE1-243[»]
5JB3electron microscopy5.34E1-243[»]
5JBHelectron microscopy5.34E1-243[»]
ProteinModelPortaliQ8U011
SMRiQ8U011
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 105S4 RNA-bindingUniRule annotationAdd BLAST63

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR018199 Ribosomal_S4e_N_CS
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS00528 RIBOSOMAL_S4E, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

Q8U011-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKGPKRHL KRLAAPTSWY IERKAYKWAV RPRPGPHNMR TSIPLLYIVR
60 70 80 90 100
DYLGYAKTAR EARKILNEGK FLVDGRVRKD YKFPVGIMDV VSIPETGEHY
110 120 130 140 150
RVLPNRIGKL ILHPISEDEA FIKPLRIRNK RMIKGARVQL NFHDGTNHIV
160 170 180 190 200
SIAEKDNYFT SYTVLMKVPE REILEVLPFE KGAYVFVTQG KNVARKGRIV
210 220 230 240
EIKRFPMGWP DVVTIEDEEG ELFDTLKEYA FVVGTDKPKI SLP
Length:243
Mass (Da):28,146
Last modified:June 1, 2002 - v1
Checksum:i0A0BF515902E1CE7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA Translation: AAL81936.1
RefSeqiWP_011012953.1, NC_003413.1

Genome annotation databases

EnsemblBacteriaiAAL81936; AAL81936; PF1812
GeneIDi1469691
KEGGipfu:PF1812
PATRICifig|186497.12.peg.1883

Similar proteinsi

Entry informationi

Entry nameiRS4E_PYRFU
AccessioniPrimary (citable) accession number: Q8U011
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 2, 2002
Last sequence update: June 1, 2002
Last modified: May 23, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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