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Protein

50S ribosomal protein L24

Gene

rpl24

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation
Located at the polypeptide exit tunnel on the outside of the subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L24UniRule annotation
Alternative name(s):
Large ribosomal subunit protein uL24
Gene namesi
Name:rpl24UniRule annotation
Ordered Locus Names:PF1813
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001307781 – 12150S ribosomal protein L24Add BLAST121

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation1 Publication

Protein-protein interaction databases

STRINGi186497.PF1813.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4Nelectron microscopy9.00U1-121[»]
4V6Uelectron microscopy6.60BU1-121[»]
ProteinModelPortaliQ8U010.
SMRiQ8U010.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL24 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04094. Archaea.
COG0198. LUCA.
HOGENOMiHOG000216571.
KOiK02895.
OMAiVRIMRGD.
OrthoDBiPOG093Z0H7W.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_A. Ribosomal_L24_A. 1 hit.
InterProiView protein in InterPro
IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR005825. Ribosomal_L24/26_CS.
IPR005756. Ribosomal_L26/L24P_euk/arc.
IPR008991. Translation_prot_SH3-like.
PANTHERiPTHR11143. PTHR11143. 1 hit.
PfamiView protein in Pfam
PF00467. KOW. 1 hit.
PF16906. Ribosomal_L26. 1 hit.
SMARTiView protein in SMART
SM00739. KOW. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01080. rplX_A_E. 1 hit.
PROSITEiView protein in PROSITE
PS01108. RIBOSOMAL_L24. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8U010-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKISSKQPRK QRKFLYNAPL HVRQKLMSAP LSRELREKYK VRNLPVRVGD
60 70 80 90 100
KVRIMRGDYK GHEGKVVEVD LKRYRIYVEG ATLRKTNGTE VFYPIHPSNV
110 120
MIIELNLEDE KRKKIIERRA G
Length:121
Mass (Da):14,332
Last modified:March 29, 2004 - v2
Checksum:iEEEB285D3F0AB1AD
GO

Sequence cautioni

The sequence AAL81937 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA. Translation: AAL81937.1. Different initiation.
RefSeqiWP_014835567.1. NC_003413.1.

Genome annotation databases

EnsemblBacteriaiAAL81937; AAL81937; PF1813.
GeneIDi1469692.
KEGGipfu:PF1813.
PATRICifig|186497.12.peg.1884.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL24_PYRFU
AccessioniPrimary (citable) accession number: Q8U010
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: March 29, 2004
Last modified: June 7, 2017
This is version 80 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families