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Protein

30S ribosomal protein S17

Gene

rps17

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciPFUR186497:G1FZR-1874-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S17UniRule annotation
Alternative name(s):
Small ribosomal subunit protein uS17
Gene namesi
Name:rps17UniRule annotation
Ordered Locus Names:PF1815
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002326151 – 11330S ribosomal protein S17Add BLAST113

Proteomic databases

PRIDEiQ8U008

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation1 Publication

Protein-protein interaction databases

STRINGi186497.PF1815

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4Nelectron microscopy9.00R1-113[»]
4V6Uelectron microscopy6.60AR1-113[»]
5JB3electron microscopy5.34R1-113[»]
5JBHelectron microscopy5.34R1-113[»]
ProteinModelPortaliQ8U008
SMRiQ8U008
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS17 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04096 Archaea
COG0186 LUCA
HOGENOMiHOG000231341
KOiK02961
OMAiKKYERYE
OrthoDBiPOG093Z0IP7

Family and domain databases

HAMAPiMF_01345_A Ribosomal_S17_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000266 Ribosomal_S17/S11
IPR028333 Ribosomal_S17_arc-typ
IPR019978 Ribosomal_S17_archaeal
IPR019979 Ribosomal_S17_CS
PANTHERiPTHR10744 PTHR10744, 1 hit
PfamiView protein in Pfam
PF00366 Ribosomal_S17, 1 hit
PRINTSiPR00973 RIBOSOMALS17
ProDomiView protein in ProDom or Entries sharing at least one domain
PD001295 Ribosomal_S17, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR03630 uS17_arch, 1 hit
PROSITEiView protein in PROSITE
PS00056 RIBOSOMAL_S17, 1 hit

Sequencei

Sequence statusi: Complete.

Q8U008-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMRDIGLRVQ PPAEKCDDPK CPWHGNLKIH GRVFEGIVVS DKPRKTVTVE
60 70 80 90 100
RQYYFYLNKY ERYELRRSKI HAHNPPCINA KVGDKVLIAE TRPLSKTKHF
110
VVVAVLERAE ERR
Length:113
Mass (Da):13,268
Last modified:June 1, 2002 - v1
Checksum:i6FA03634D540849D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA Translation: AAL81939.1
RefSeqiWP_011012956.1, NC_003413.1

Genome annotation databases

EnsemblBacteriaiAAL81939; AAL81939; PF1815
GeneIDi1469694
KEGGipfu:PF1815
PATRICifig|186497.12.peg.1886

Similar proteinsi

Entry informationi

Entry nameiRS17_PYRFU
AccessioniPrimary (citable) accession number: Q8U008
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 18, 2006
Last sequence update: June 1, 2002
Last modified: May 23, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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