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Protein

50S ribosomal protein L35Ae

Gene

rpl35ae

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L35AeUniRule annotation
Alternative name(s):
Large ribosomal subunit protein eL33
Gene namesi
Name:rpl35aeUniRule annotation
Ordered Locus Names:PF1872
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001928121 – 8750S ribosomal protein L35AeAdd BLAST87

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.1 Publication

Protein-protein interaction databases

STRINGi186497.PF1872

Structurei

Secondary structure

187
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi4 – 11Combined sources8
Beta strandi14 – 18Combined sources5
Beta strandi21 – 27Combined sources7
Helixi32 – 38Combined sources7
Beta strandi42 – 45Combined sources4
Beta strandi53 – 65Combined sources13
Beta strandi67 – 70Combined sources4
Beta strandi76 – 78Combined sources3
Beta strandi83 – 85Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1SQRNMR-A1-87[»]
2LP6NMR-A1-87[»]
4V6Uelectron microscopy6.60Bc1-87[»]
ProteinModelPortaliQ8TZV6
SMRiQ8TZV6
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8TZV6

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL33 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04304 Archaea
COG2451 LUCA
HOGENOMiHOG000195636
KOiK02917
OMAiGKIVRVH
OrthoDBiPOG093Z0J15

Family and domain databases

Gene3Di2.40.10.190, 1 hit
HAMAPiMF_00573 Ribosomal_L35Ae, 1 hit
InterProiView protein in InterPro
IPR038661 L35A_sf
IPR001780 Ribosomal_L35A
IPR018266 Ribosomal_L35Ae_CS
IPR009000 Transl_B-barrel_sf
PANTHERiPTHR10902 PTHR10902, 1 hit
PfamiView protein in Pfam
PF01247 Ribosomal_L35Ae, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012670 Ribosomal_L35Ae, 1 hit
SUPFAMiSSF50447 SSF50447, 1 hit
PROSITEiView protein in PROSITE
PS01105 RIBOSOMAL_L35AE, 1 hit

Sequencei

Sequence statusi: Complete.

Q8TZV6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIKGVVLSY RRSKENQHNN VMIIKPLDVN SREEASKLIG RLVLWKSPSG
60 70 80
KILKGKIVRV HGTKGAVRAR FEKGLPGQAL GDYVEIV
Length:87
Mass (Da):9,736
Last modified:June 1, 2002 - v1
Checksum:iF5C425AAA3A09247
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA Translation: AAL81996.1
RefSeqiWP_011013011.1, NC_003413.1

Genome annotation databases

EnsemblBacteriaiAAL81996; AAL81996; PF1872
GeneIDi1469751
KEGGipfu:PF1872
PATRICifig|186497.12.peg.1942

Similar proteinsi

Entry informationi

Entry nameiRL35A_PYRFU
AccessioniPrimary (citable) accession number: Q8TZV6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 26, 2002
Last sequence update: June 1, 2002
Last modified: April 25, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
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Main funding by: National Institutes of Health