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Protein

50S ribosomal protein L11

Gene

rpl11

Organism
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L11UniRule annotation
Alternative name(s):
Large ribosomal subunit protein uL11
Gene namesi
Name:rpl11UniRule annotation
Ordered Locus Names:PF1991
OrganismiPyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Taxonomic identifieri186497 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000001013 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001044441 – 16450S ribosomal protein L11Add BLAST164

Proteomic databases

PRIDEiQ8TZK0

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit (PubMed:23222135). Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation1 Publication

Protein-protein interaction databases

STRINGi186497.PF1991

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V6Uelectron microscopy6.60BH1-164[»]
ProteinModelPortaliQ8TZK0
SMRiQ8TZK0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL11 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04372 Archaea
COG0080 LUCA
HOGENOMiHOG000082124
KOiK02867
OMAiCKQFNAK
OrthoDBiPOG093Z0DOQ

Family and domain databases

CDDicd00349 Ribosomal_L11, 1 hit
Gene3Di1.10.10.250, 1 hit
HAMAPiMF_00736 Ribosomal_L11, 1 hit
InterProiView protein in InterPro
IPR000911 Ribosomal_L11/L12
IPR036796 Ribosomal_L11/L12_N_sf
IPR020783 Ribosomal_L11_C
IPR036769 Ribosomal_L11_C_sf
IPR020785 Ribosomal_L11_CS
IPR020784 Ribosomal_L11_N
PANTHERiPTHR11661 PTHR11661, 1 hit
PfamiView protein in Pfam
PF00298 Ribosomal_L11, 1 hit
PF03946 Ribosomal_L11_N, 1 hit
SMARTiView protein in SMART
SM00649 RL11, 1 hit
SUPFAMiSSF46906 SSF46906, 1 hit
SSF54747 SSF54747, 1 hit
PROSITEiView protein in PROSITE
PS00359 RIBOSOMAL_L11, 1 hit

Sequencei

Sequence statusi: Complete.

Q8TZK0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKQVVEVLV EGGKATPGPP LGPAIGPLGL NVKQVVDKIN EATKDFAGMQ
60 70 80 90 100
VPVKIIVDPV TKQFEIEVGV PPTSQLIKKE LGLEKGSGEP KHNIVGNLTM
110 120 130 140 150
EQVIKIAKMK KDQMLALTLK AAAKEVIGTA LSMGVTVEGK DPREVQKEID
160
EGVYDELFEK AEKE
Length:164
Mass (Da):17,635
Last modified:June 1, 2002 - v1
Checksum:i6C6C5EA7F3A49F82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009950 Genomic DNA Translation: AAL82115.1
RefSeqiWP_011013135.1, NC_003413.1

Genome annotation databases

EnsemblBacteriaiAAL82115; AAL82115; PF1991
GeneIDi1469875
KEGGipfu:PF1991
PATRICifig|186497.12.peg.2067

Similar proteinsi

Entry informationi

Entry nameiRL11_PYRFU
AccessioniPrimary (citable) accession number: Q8TZK0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2003
Last sequence update: June 1, 2002
Last modified: March 28, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
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Main funding by: National Institutes of Health