Q8TYQ7 (Q8TYQ7_METKA) Unreviewed, UniProtKB/TrEMBL
Last modified
November 16, 2011.
Version 66.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Adenylosuccinate synthetase HAMAP MF_00011 Short name=AMPSase HAMAP MF_00011 Short name=AdSS HAMAP MF_00011 EC=6.3.4.4 HAMAP MF_00011 Alternative name(s): IMP--aspartate ligase HAMAP MF_00011 | ||||
| Gene names |
| ||||
| Organism | Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) | ||||
| Taxonomic identifier | 190192 [NCBI] | ||||
| Taxonomic lineage | Archaea › Euryarchaeota › Methanopyri › Methanopyrales › Methanopyraceae › Methanopyrus |
Protein attributes
| Sequence length | 346 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Plays an important role in the de novo pathway of purine nucleotide biosynthesis By similarity. RuleBase RU000520 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP By similarity. HAMAP MF_00011 |
| Catalytic activity | GTP + IMP + L-aspartate = GDP + phosphate + N(6)-(1,2-dicarboxyethyl)-AMP. HAMAP MF_00011 RuleBase RU000520 |
| Cofactor | Binds 1 magnesium ion per subunit By similarity. HAMAP MF_00011 |
| Pathway | Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 1/2. HAMAP MF_00011 RuleBase RU000520 |
| Subunit structure | Homodimer By similarity. HAMAP MF_00011 |
| Subcellular location | Cytoplasm By similarity HAMAP MF_00011. |
| Sequence similarities | Belongs to the adenylosuccinate synthetase family. RuleBase RU004163 HAMAP MF_00011 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Purine biosynthesis HAMAP MF_00011 RuleBase RU000520 |
| Cellular component | Cytoplasm HAMAP MF_00011 |
| Ligand | GTP-binding HAMAP MF_00011 RuleBase RU000520 Magnesium HAMAP MF_00011 RuleBase RU000520 Metal-binding HAMAP MF_00011 RuleBase RU000520 Nucleotide-binding |
| Molecular function | Ligase HAMAP MF_00011 RuleBase RU000520 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | purine nucleotide biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | GTP binding Inferred from electronic annotation. Source: HAMAP adenylosuccinate synthase activityInferred from electronic annotation. Source: HAMAP magnesium ion bindingInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 16 – 22 | 7 | GTP By similarity HAMAP MF_00011 | ||||||
| Nucleotide binding | 46 – 48 | 3 | GTP By similarity HAMAP MF_00011 | ||||||
| Nucleotide binding | 294 – 296 | 3 | GTP By similarity HAMAP MF_00011 | ||||||
| Nucleotide binding | 334 – 336 | 3 | GTP By similarity HAMAP MF_00011 | ||||||
| Region | 17 – 20 | 4 | IMP binding By similarity HAMAP MF_00011 | ||||||
| Region | 44 – 47 | 4 | IMP binding By similarity HAMAP MF_00011 | ||||||
| Region | 262 – 268 | 7 | Substrate binding By similarity HAMAP MF_00011 | ||||||
Sites | |||||||||
| Active site | 17 | 1 | Proton acceptor By similarity HAMAP MF_00011 | ||||||
| Active site | 47 | 1 | Proton donor By similarity HAMAP MF_00011 | ||||||
| Metal binding | 17 | 1 | Magnesium By similarity HAMAP MF_00011 | ||||||
| Metal binding | 46 | 1 | Magnesium; via carbonyl oxygen By similarity HAMAP MF_00011 | ||||||
| Binding site | 131 | 1 | IMP By similarity HAMAP MF_00011 | ||||||
| Binding site | 145 | 1 | IMP; shared with dimeric partner By similarity HAMAP MF_00011 | ||||||
| Binding site | 183 | 1 | IMP By similarity HAMAP MF_00011 | ||||||
| Binding site | 199 | 1 | IMP By similarity HAMAP MF_00011 | ||||||
| Binding site | 266 | 1 | IMP By similarity HAMAP MF_00011 | ||||||
| Binding site | 268 | 1 | GTP By similarity HAMAP MF_00011 | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens." Slesarev A.I., Mezhevaya K.V., Makarova K.S., Polushin N.N., Shcherbinina O.V., Shakhova V.V., Belova G.I., Aravind L., Natale D.A., Rogozin I.B., Tatusov R.L., Wolf Y.I., Stetter K.O., Malykh A.G., Koonin E.V., Kozyavkin S.A. Proc. Natl. Acad. Sci. U.S.A. 99:4644-4649(2002) [PubMed: 11930014] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AV19 / DSM 6324 / JCM 9639 / NBRC 100938. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE009439 Genomic DNA. Translation: AAM01452.1. |
| RefSeq | NP_613522.1. NC_003551.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1ADE based on UniProtKB P12283. |
| ProteinModelPortal | Q8TYQ7. |
| SMR | Q8TYQ7. Positions 7-346. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 1477538. |
| GenomeReviews | Gene locus MK0235 in contig AE009439_GR. |
| KEGG | mka:MK0235. |
| NMPDR | fig|190192.1.peg.235. |
Phylogenomic databases | |
| HOGENOM | HBG658237. |
| OMA | YVLGIIK. |
| ProtClustDB | PRK04293. |
Family and domain databases | |
| HAMAP | MF_00011. Adenylosucc_synth. [Tree] |
| InterPro | IPR018220. Adenylosuccinate_synthase_AS. IPR001114. Adenylosuccinate_synthetase. [Graphical view] |
| KO | K01939. |
| PANTHER | PTHR11846. Asucc_synthtase. 1 hit. |
| Pfam | PF00709. Adenylsucc_synt. 3 hits. [Graphical view] |
| SMART | SM00788. Adenylsucc_synt. 1 hit. [Graphical view] |
| PROSITE | PS01266. ADENYLOSUCCIN_SYN_1. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q8TYQ7_METKA | ||||||||
| Accession | Primary (citable) accession number: Q8TYQ7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with