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Protein
Submitted name:

ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene

MK0528

Organism
Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase, homolog of eukaryotic ligase IIIImported
Gene namesi
Ordered Locus Names:MK0528Imported
OrganismiMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)Imported
Taxonomic identifieri190192 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanopyriMethanopyralesMethanopyraceaeMethanopyrus
ProteomesiUP000001826: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi190192.MK0528.

Structurei

3D structure databases

ProteinModelPortaliQ8TXY1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8TXY1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MADPSKDVKK LSMILESEEW RVEKAIERGT IRRVRTSFPG FVYYRTVREF
60 70 80 90 100
AGFERGTLIV PSHGLLLRGF PKIERALLLE PALRSRFGEV GKVIVEEKMN
110 120 130 140 150
GHNVRVFELD GEVYAATRGG LICPYTTHKL RNMFEDELKQ FFEDYPGTVV
160 170 180 190 200
CGEFVGKENP YVSREYPEAR DVGFFVFDVR DPSGRFWSYE EKLKVDEYGL
210 220 230 240 250
ERVRCFGEFE VSEVEEIHRI VRELDREGRE GIVIKDPDRK LPPLKYTTHS
260 270 280 290 300
AHVEEIEWAF RFAFDLGRDF VLTRTIREGF QSFEWCEKDR ELKRRGAEIG
310 320 330 340 350
RAIVEGLRRA VEQVVEEGEA YEEIPLTFES REWFERYEDF VKRVTGGTHS
360 370 380
LKIIEEKEDG TVRAVLRKRY FGTGDKVSRI LEEGVL
Length:386
Mass (Da):45,140
Last modified:June 1, 2002 - v1
Checksum:i8E3B1E66BFE7F655
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009439 Genomic DNA. Translation: AAM01743.1.
RefSeqiNP_613813.1. NC_003551.1.
WP_011018898.1. NC_003551.1.

Genome annotation databases

EnsemblBacteriaiAAM01743; AAM01743; MK0528.
GeneIDi1476629.
KEGGimka:MK0528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009439 Genomic DNA. Translation: AAM01743.1.
RefSeqiNP_613813.1. NC_003551.1.
WP_011018898.1. NC_003551.1.

3D structure databases

ProteinModelPortaliQ8TXY1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190192.MK0528.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM01743; AAM01743; MK0528.
GeneIDi1476629.
KEGGimka:MK0528.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AV19 / DSM 6324 / JCM 9639 / NBRC 100938Imported.

Entry informationi

Entry nameiQ8TXY1_METKA
AccessioniPrimary (citable) accession number: Q8TXY1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: February 4, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.