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Q8TXY1 (Q8TXY1_METKA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MK0528 EMBL AAM01743.1
OrganismMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) [Reference proteome] [HAMAP] EMBL AAM01743.1
Taxonomic identifier190192 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanopyriMethanopyralesMethanopyraceaeMethanopyrus

Protein attributes

Sequence length386 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AAM01743.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8TXY1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 8E3B1E66BFE7F655

FASTA38645,140
        10         20         30         40         50         60 
MADPSKDVKK LSMILESEEW RVEKAIERGT IRRVRTSFPG FVYYRTVREF AGFERGTLIV 

        70         80         90        100        110        120 
PSHGLLLRGF PKIERALLLE PALRSRFGEV GKVIVEEKMN GHNVRVFELD GEVYAATRGG 

       130        140        150        160        170        180 
LICPYTTHKL RNMFEDELKQ FFEDYPGTVV CGEFVGKENP YVSREYPEAR DVGFFVFDVR 

       190        200        210        220        230        240 
DPSGRFWSYE EKLKVDEYGL ERVRCFGEFE VSEVEEIHRI VRELDREGRE GIVIKDPDRK 

       250        260        270        280        290        300 
LPPLKYTTHS AHVEEIEWAF RFAFDLGRDF VLTRTIREGF QSFEWCEKDR ELKRRGAEIG 

       310        320        330        340        350        360 
RAIVEGLRRA VEQVVEEGEA YEEIPLTFES REWFERYEDF VKRVTGGTHS LKIIEEKEDG 

       370        380 
TVRAVLRKRY FGTGDKVSRI LEEGVL 

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References

[1]"The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens."
Slesarev A.I., Mezhevaya K.V., Makarova K.S., Polushin N.N., Shcherbinina O.V., Shakhova V.V., Belova G.I., Aravind L., Natale D.A., Rogozin I.B., Tatusov R.L., Wolf Y.I., Stetter K.O., Malykh A.G., Koonin E.V., Kozyavkin S.A.
Proc. Natl. Acad. Sci. U.S.A. 99:4644-4649(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AV19 / DSM 6324 / JCM 9639 / NBRC 100938.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009439 Genomic DNA. Translation: AAM01743.1.
RefSeqNP_613813.1. NC_003551.1.

3D structure databases

ProteinModelPortalQ8TXY1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING190192.MK0528.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM01743; AAM01743; MK0528.
GeneID1476629.
KEGGmka:MK0528.

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.
ProtClustDBCLSK862643.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8TXY1_METKA
AccessionPrimary (citable) accession number: Q8TXY1
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)