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Protein
Submitted name:

ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene

MK0528

Organism
Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMKAN190192:G139I-540-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase, homolog of eukaryotic ligase IIIImported
Gene namesi
Ordered Locus Names:MK0528Imported
OrganismiMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)Imported
Taxonomic identifieri190192 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanopyriMethanopyralesMethanopyraceaeMethanopyrus
Proteomesi
  • UP000001826 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi190192.MK0528

Structurei

3D structure databases

ProteinModelPortaliQ8TXY1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini92 – 239RNA_ligaseInterPro annotationAdd BLAST148

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

Q8TXY1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADPSKDVKK LSMILESEEW RVEKAIERGT IRRVRTSFPG FVYYRTVREF
60 70 80 90 100
AGFERGTLIV PSHGLLLRGF PKIERALLLE PALRSRFGEV GKVIVEEKMN
110 120 130 140 150
GHNVRVFELD GEVYAATRGG LICPYTTHKL RNMFEDELKQ FFEDYPGTVV
160 170 180 190 200
CGEFVGKENP YVSREYPEAR DVGFFVFDVR DPSGRFWSYE EKLKVDEYGL
210 220 230 240 250
ERVRCFGEFE VSEVEEIHRI VRELDREGRE GIVIKDPDRK LPPLKYTTHS
260 270 280 290 300
AHVEEIEWAF RFAFDLGRDF VLTRTIREGF QSFEWCEKDR ELKRRGAEIG
310 320 330 340 350
RAIVEGLRRA VEQVVEEGEA YEEIPLTFES REWFERYEDF VKRVTGGTHS
360 370 380
LKIIEEKEDG TVRAVLRKRY FGTGDKVSRI LEEGVL
Length:386
Mass (Da):45,140
Last modified:June 1, 2002 - v1
Checksum:i8E3B1E66BFE7F655
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009439 Genomic DNA Translation: AAM01743.1

Genome annotation databases

EnsemblBacteriaiAAM01743; AAM01743; MK0528
KEGGimka:MK0528
PATRICifig|190192.8.peg.562

Entry informationi

Entry nameiQ8TXY1_METKA
AccessioniPrimary (citable) accession number: Q8TXY1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: March 28, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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