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Protein

30S ribosomal protein S4e

Gene

rps4e

Organism
Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4eUniRule annotation
Gene namesi
Name:rps4eUniRule annotation
Ordered Locus Names:MK1220
OrganismiMethanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Taxonomic identifieri190192 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanopyriMethanopyralesMethanopyraceaeMethanopyrus
Proteomesi
  • UP000001826 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001308501 – 26030S ribosomal protein S4eAdd BLAST260

Proteomic databases

PRIDEiQ8TW18

Interactioni

Protein-protein interaction databases

STRINGi190192.MK1220

Structurei

3D structure databases

SMRiQ8TW18
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini46 – 111S4 RNA-bindingUniRule annotationAdd BLAST66

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04093 Archaea
COG1471 LUCA
HOGENOMiHOG000231324
KOiK02987
OMAiRKDYKFP
OrthoDBiPOG093Z0C23

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di2.30.30.30, 1 hit
2.40.50.740, 1 hit
HAMAPiMF_00485 Ribosomal_S4e, 1 hit
InterProiView protein in InterPro
IPR014722 Rib_L2_dom2
IPR000876 Ribosomal_S4e
IPR013845 Ribosomal_S4e_central_region
IPR038237 Ribosomal_S4e_central_sf
IPR013843 Ribosomal_S4e_N
IPR018199 Ribosomal_S4e_N_CS
IPR002942 S4_RNA-bd
PANTHERiPTHR11581 PTHR11581, 1 hit
PfamiView protein in Pfam
PF00900 Ribosomal_S4e, 1 hit
PF08071 RS4NT, 1 hit
PF01479 S4, 1 hit
PIRSFiPIRSF002116 Ribosomal_S4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667 Ribosomal_S4e_central, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS00528 RIBOSOMAL_S4E, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

Q8TW18-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRARSGPKR HVKRLAAPYA WPIPRKEGGK FAPRPYPGPH TMDTSVPLLI
60 70 80 90 100
LVRDMLGYAD YAREARKIIT RGEIYVDGVV RKEPKFPVGI MDVVEIPRTG
110 120 130 140 150
DRYRVVMNEH HRLDVVPISE EEARVKVCRI KNKTYVRGGN LQITMHDGKN
160 170 180 190 200
WLVEIEDPTD PKEDVYSVGD SLVLELPEPD SGESWKVVDH IPFEEGVWVY
210 220 230 240 250
AMTGRHSGEV GRVVEIQTFE GPQEDLITVE NPEGDQFQTT KGRLIAIGKD
260
EPLVTVRKEE
Length:260
Mass (Da):29,474
Last modified:June 1, 2002 - v1
Checksum:iDB126C89C7ADD0BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE009439 Genomic DNA Translation: AAM02433.1

Genome annotation databases

EnsemblBacteriaiAAM02433; AAM02433; MK1220
KEGGimka:MK1220
PATRICifig|190192.8.peg.1323

Similar proteinsi

Entry informationi

Entry nameiRS4E_METKA
AccessioniPrimary (citable) accession number: Q8TW18
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2002
Last sequence update: June 1, 2002
Last modified: March 28, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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