Q8TSS5 (Q8TSS5_METAC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL AAM04160.1

Gene names

Ordered Locus Names:

MA_0720

Organism

Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) [Reference proteome] [HAMAP] EMBL AAM04160.1

Taxonomic identifier

188937 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina › Methanosarcina acetivorans

Protein attributes

Sequence length	311 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	exosome (RNase complex) Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8TSS5 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: 3E98EA5833355F8C	FASTA	311	34,656
	10 20 30 40 50 60 MIRIRKNKTT RKKLTGPGEG KPVAEKSVPV AAESREQFKG QPRDQPRDQF KGQSRGQSRD 70 80 90 100 110 120 QFKGHSRDQF KGQSRGSRDQ SKDQFKGDLG KKRRFPYSKK SPRDRKEIPG FRPPAREPVR 130 140 150 160 170 180 SEEDLEKGGF VLPGELVGTT EEFKSGAGTT VIGGDIYSTA TGNVLIDRKS RVVSVKPNTL 190 200 210 220 230 240 TPNILKVGDI VYGKITDVRE SGAMVEVAGI EGKENREIVN TRPGDIHVSN VRDSYVKRLS 250 260 270 280 290 300 DEFRPSDIVK ARVIDVDRMR LTTSEDSLGV VKAYCSNCRG ELVLEGKKLK CPVCNMTETR 310 KISTEYGKGI R

References

[1]

"The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity." Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P. , McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A.M., Hedderich R., Ingram-Smith C., Kuettner H.C., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I.T., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B. Genome Res. 12:532-542(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE010299 Genomic DNA. Translation: AAM04160.1.
RefSeq	NP_615680.1. NC_003552.1.
3D structure databases
HSSP	HSSP built from PDB template 1SRO based on UniProtKB P05055.
ProteinModelPortal	Q8TSS5.
ModBase	Search...
Protein-protein interaction databases
STRING	188937.MA0720.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAM04160; AAM04160; MA_0720.
GeneID	1472612.
KEGG	mac:MA0720.
Phylogenomic databases
eggNOG	COG1096.
KO	K07573.
OMA	SRDQFKG.
ProtClustDB	CLSK2579051.
Enzyme and pathway databases
BioCyc	MACE188937:GI2O-788-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR019495. EXOSC1. IPR025721. Exosome_cplx_N_dom. IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF14382. ECR1_N. 1 hit. PF10447. EXOSC1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8TSS5_METAC

Accession

Primary (citable) accession number: Q8TSS5

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	May 1, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)