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Q8TSS5

- Q8TSS5_METAC

UniProt

Q8TSS5 - Q8TSS5_METAC

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Protein
Submitted name:

Uncharacterized protein

Gene
MA_0720
Organism
Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMACE188937:GI2O-731-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:MA_0720Imported
OrganismiMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)Imported
Taxonomic identifieri188937 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
ProteomesiUP000002487: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. exosome (RNase complex) Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi188937.MA0720.

Structurei

3D structure databases

ProteinModelPortaliQ8TSS5.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1096.
KOiK07573.
OMAiSRDQFKG.
PhylomeDBiQ8TSS5.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR022967. RNA-binding_domain_S1.
[Graphical view]
PfamiPF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8TSS5-1 [UniParc]FASTAAdd to Basket

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MIRIRKNKTT RKKLTGPGEG KPVAEKSVPV AAESREQFKG QPRDQPRDQF    50
KGQSRGQSRD QFKGHSRDQF KGQSRGSRDQ SKDQFKGDLG KKRRFPYSKK 100
SPRDRKEIPG FRPPAREPVR SEEDLEKGGF VLPGELVGTT EEFKSGAGTT 150
VIGGDIYSTA TGNVLIDRKS RVVSVKPNTL TPNILKVGDI VYGKITDVRE 200
SGAMVEVAGI EGKENREIVN TRPGDIHVSN VRDSYVKRLS DEFRPSDIVK 250
ARVIDVDRMR LTTSEDSLGV VKAYCSNCRG ELVLEGKKLK CPVCNMTETR 300
KISTEYGKGI R 311
Length:311
Mass (Da):34,656
Last modified:June 1, 2002 - v1
Checksum:i3E98EA5833355F8C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE010299 Genomic DNA. Translation: AAM04160.1.
RefSeqiNP_615680.1. NC_003552.1.

Genome annotation databases

EnsemblBacteriaiAAM04160; AAM04160; MA_0720.
GeneIDi1472612.
KEGGimac:MA0720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE010299 Genomic DNA. Translation: AAM04160.1 .
RefSeqi NP_615680.1. NC_003552.1.

3D structure databases

ProteinModelPortali Q8TSS5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 188937.MA0720.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAM04160 ; AAM04160 ; MA_0720 .
GeneIDi 1472612.
KEGGi mac:MA0720.

Phylogenomic databases

eggNOGi COG1096.
KOi K07573.
OMAi SRDQFKG.
PhylomeDBi Q8TSS5.

Enzyme and pathway databases

BioCyci MACE188937:GI2O-731-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR019495. EXOSC1.
IPR025721. Exosome_cplx_N_dom.
IPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR022967. RNA-binding_domain_S1.
[Graphical view ]
Pfami PF14382. ECR1_N. 1 hit.
PF10447. EXOSC1. 1 hit.
[Graphical view ]
SMARTi SM00316. S1. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50126. S1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity."
    Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.
    , McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A., Hedderich R., Ingram-Smith C., Kuettner C.H., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.
    Genome Res. 12:532-542(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2A.

Entry informationi

Entry nameiQ8TSS5_METAC
AccessioniPrimary (citable) accession number: Q8TSS5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: July 9, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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