Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q8TSS5

- Q8TSS5_METAC

UniProt

Q8TSS5 - Q8TSS5_METAC

Protein
Submitted name:

Uncharacterized protein

Gene

MA_0720

Organism
Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Jun 2002)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro

    Enzyme and pathway databases

    BioCyciMACE188937:GI2O-731-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:MA_0720Imported
    OrganismiMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)Imported
    Taxonomic identifieri188937 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
    ProteomesiUP000002487: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. exosome (RNase complex) Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi188937.MA0720.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8TSS5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1096.
    KOiK07573.
    OMAiSRDQFKG.
    PhylomeDBiQ8TSS5.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR019495. EXOSC1.
    IPR025721. Exosome_cplx_N_dom.
    IPR012340. NA-bd_OB-fold.
    IPR003029. Rbsml_prot_S1_RNA-bd_dom.
    IPR022967. RNA-binding_domain_S1.
    [Graphical view]
    PfamiPF14382. ECR1_N. 1 hit.
    PF10447. EXOSC1. 1 hit.
    [Graphical view]
    SMARTiSM00316. S1. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50126. S1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8TSS5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIRIRKNKTT RKKLTGPGEG KPVAEKSVPV AAESREQFKG QPRDQPRDQF    50
    KGQSRGQSRD QFKGHSRDQF KGQSRGSRDQ SKDQFKGDLG KKRRFPYSKK 100
    SPRDRKEIPG FRPPAREPVR SEEDLEKGGF VLPGELVGTT EEFKSGAGTT 150
    VIGGDIYSTA TGNVLIDRKS RVVSVKPNTL TPNILKVGDI VYGKITDVRE 200
    SGAMVEVAGI EGKENREIVN TRPGDIHVSN VRDSYVKRLS DEFRPSDIVK 250
    ARVIDVDRMR LTTSEDSLGV VKAYCSNCRG ELVLEGKKLK CPVCNMTETR 300
    KISTEYGKGI R 311
    Length:311
    Mass (Da):34,656
    Last modified:June 1, 2002 - v1
    Checksum:i3E98EA5833355F8C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE010299 Genomic DNA. Translation: AAM04160.1.
    RefSeqiNP_615680.1. NC_003552.1.

    Genome annotation databases

    EnsemblBacteriaiAAM04160; AAM04160; MA_0720.
    GeneIDi1472612.
    KEGGimac:MA0720.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE010299 Genomic DNA. Translation: AAM04160.1 .
    RefSeqi NP_615680.1. NC_003552.1.

    3D structure databases

    ProteinModelPortali Q8TSS5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 188937.MA0720.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAM04160 ; AAM04160 ; MA_0720 .
    GeneIDi 1472612.
    KEGGi mac:MA0720.

    Phylogenomic databases

    eggNOGi COG1096.
    KOi K07573.
    OMAi SRDQFKG.
    PhylomeDBi Q8TSS5.

    Enzyme and pathway databases

    BioCyci MACE188937:GI2O-731-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR019495. EXOSC1.
    IPR025721. Exosome_cplx_N_dom.
    IPR012340. NA-bd_OB-fold.
    IPR003029. Rbsml_prot_S1_RNA-bd_dom.
    IPR022967. RNA-binding_domain_S1.
    [Graphical view ]
    Pfami PF14382. ECR1_N. 1 hit.
    PF10447. EXOSC1. 1 hit.
    [Graphical view ]
    SMARTi SM00316. S1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50126. S1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity."
      Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.
      , McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A., Hedderich R., Ingram-Smith C., Kuettner C.H., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.
      Genome Res. 12:532-542(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2AImported.

    Entry informationi

    Entry nameiQ8TSS5_METAC
    AccessioniPrimary (citable) accession number: Q8TSS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 1, 2002
    Last sequence update: June 1, 2002
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3