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Protein
Submitted name:

Homospermidine synthase

Gene

MA_1636

Organism
Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxidoreductase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMACE188937:GI2O-1653-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Homospermidine synthaseImported
Gene namesi
Ordered Locus Names:MA_1636Imported
OrganismiMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)Imported
Taxonomic identifieri188937 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
ProteomesiUP000002487 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi188937.MA1636.

Structurei

3D structure databases

ProteinModelPortaliQ8TQB2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5310.
InParanoidiQ8TQB2.
KOiK00808.
OMAiSIADYFT.
PhylomeDBiQ8TQB2.

Family and domain databases

Gene3Di3.30.360.30. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR023181. Homospermid_syn-like_domain.
IPR016040. NAD(P)-bd_dom.
IPR005097. Saccharopine_DH/HSpermid_syn.
[Graphical view]
PfamiPF03435. Saccharop_dh. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8TQB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPCVYETMKK KFSNKILVIG YGSVSQCTLP LLLDKLDVPL ENITLIDFED
60 70 80 90 100
KSKALKKYTN QGLRFVCEKI NPKNLDQVLS QYMEDEGLII DLSWNIDAND
110 120 130 140 150
ILTWCHNHSV LYVNTSVEVW DPTEDFLTRS LLEKSLYLRQ MKLRELSRDW
160 170 180 190 200
KDSPTAVVDH GANPGLITHF VKQGLLDIAA RTCADKKVSP EDEQEIALLA
210 220 230 240 250
KNRDFARLAQ KLGVRVIHCS ERDTQVANRA KEVNEFVGTW SIEGLREEGT
260 270 280 290 300
APVEIAWGTH ENKLPPLTHM PPYEPKNVIF LPQMGMNTWV RSWIPDEEIV
310 320 330 340 350
GMVIRHGESY GLSKLLTVRD NDEAVYRPTV HYAYMPCHDT LSSLCELRGR
360 370 380 390 400
NYELQPRLRI MTNEIVSGED IMGALLMGHS YNSWWTGSAL GIEETRSLAP
410 420 430 440 450
GQNATTLQVA AGVVAAILWM LENPREGIKT PEDLPHDFVL DIAKPYLGKF
460 470 480
ISTPSDWTPL KNRKIHFKEN PAVKHDPDPW QFENFQFVG
Length:489
Mass (Da):55,671
Last modified:May 31, 2002 - v1
Checksum:i959CDC55318D5E75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE010299 Genomic DNA. Translation: AAM05046.1.
RefSeqiNP_616566.1. NC_003552.1.
WP_011021643.1. NC_003552.1.

Genome annotation databases

EnsemblBacteriaiAAM05046; AAM05046; MA_1636.
GeneIDi1473524.
KEGGimac:MA1636.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE010299 Genomic DNA. Translation: AAM05046.1.
RefSeqiNP_616566.1. NC_003552.1.
WP_011021643.1. NC_003552.1.

3D structure databases

ProteinModelPortaliQ8TQB2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi188937.MA1636.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM05046; AAM05046; MA_1636.
GeneIDi1473524.
KEGGimac:MA1636.

Phylogenomic databases

eggNOGiCOG5310.
InParanoidiQ8TQB2.
KOiK00808.
OMAiSIADYFT.
PhylomeDBiQ8TQB2.

Enzyme and pathway databases

BioCyciMACE188937:GI2O-1653-MONOMER.

Family and domain databases

Gene3Di3.30.360.30. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR023181. Homospermid_syn-like_domain.
IPR016040. NAD(P)-bd_dom.
IPR005097. Saccharopine_DH/HSpermid_syn.
[Graphical view]
PfamiPF03435. Saccharop_dh. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity."
    Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.
    , McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A., Hedderich R., Ingram-Smith C., Kuettner C.H., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.
    Genome Res. 12:532-542(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2AImported.

Entry informationi

Entry nameiQ8TQB2_METAC
AccessioniPrimary (citable) accession number: Q8TQB2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2002
Last sequence update: May 31, 2002
Last modified: March 3, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.