Q8TPB3 (Q8TPB3_METAC) Unreviewed, UniProtKB/TrEMBL
Last modified
November 16, 2011.
Version 52.
History...
Names and origin
| Protein names | Submitted name: Glycogen debranching enzyme EMBL AAM05403.1 | ||||
| Gene names |
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| Organism | Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) | ||||
| Taxonomic identifier | 188937 [NCBI] | ||||
| Taxonomic lineage | Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina |
Protein attributes
| Sequence length | 752 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | glycogen catabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro glycogen debranching enzyme activityInferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compoundsInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity." Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P. Birren B.Genome Res. 12:532-542(2002) [PubMed: 11932238] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2A. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE010299 Genomic DNA. Translation: AAM05403.1. |
| RefSeq | NP_616923.1. NC_003552.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1BF2 based on UniProtKB P10342. |
| ProteinModelPortal | Q8TPB3. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 1473889. |
| GenomeReviews | Gene locus MA_2000 in contig AE010299_GR. |
| KEGG | mac:MA2000. |
| NMPDR | fig|188937.1.peg.1949. |
Phylogenomic databases | |
| HOGENOM | HBG350946. |
| OMA | SIYSEHA. |
| ProtClustDB | CLSK568886. |
Family and domain databases | |
| InterPro | IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR011837. Glycogen_debranch_debranch. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view] |
| Gene3D | G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 2 hits. |
| KO | K02438. |
| PANTHER | PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF74. PTHR10357:SF74. 1 hit. |
| Pfam | PF00128. Alpha-amylase. 1 hit. [Graphical view] |
| SUPFAM | SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit. |
| TIGRFAMs | TIGR02100. GlgX_debranch. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | Q8TPB3_METAC | ||||||||
| Accession | Primary (citable) accession number: Q8TPB3 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
