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Protein
Submitted name:

RIO1/ZK632.3/MJ0444 family protein

Gene

MA_2518

Organism
Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciMACE188937:GI2O-2543-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RIO1/ZK632.3/MJ0444 family proteinImported
Gene namesi
Ordered Locus Names:MA_2518Imported
OrganismiMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)Imported
Taxonomic identifieri188937 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
ProteomesiUP000002487 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi188937.MA2518.

Structurei

3D structure databases

ProteinModelPortaliQ8TMY0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0478.
InParanoidiQ8TMY0.
KOiK07179.
OMAiHREGYTN.
PhylomeDBiQ8TMY0.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR030484. Rio2.
IPR015285. RIO2_wHTH_N.
IPR018934. RIO_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10593:SF1. PTHR10593:SF1. 1 hit.
PfamiPF01163. RIO1. 1 hit.
PF09202. Rio2_N. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8TMY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDEVLKVFK KLDAKDFRIL TGIETGMKHF EWVPVEELNK YTKLPFDKLE
60 70 80 90 100
YRLKRLVKDK LVVRTTQPYE GFQIYFEGYD ALALNAFVKR KSINAIGDEI
110 120 130 140 150
GVGKESVIYE AIRQPELAIG EPYPVIIKFH REGRTSFKQI KRVREHLGER
160 170 180 190 200
EHFSWIYAAR LAAQREYEIM TQLYPRVSLP KPLDQNRHAI IMELAKGNLL
210 220 230 240 250
SKTKLLDPEW YLDEILRQVK ITYSLGVIHA DLSEYNIFVS EDSVQFIDWP
260 270 280 290 300
QYITPDHPHA DEILERDVSN VLAHFSRKYN IERELEEVLE EIKSAAEKSV

EETAEEA
Length:307
Mass (Da):35,986
Last modified:June 1, 2002 - v1
Checksum:iE62BB1D62FAC762A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE010299 Genomic DNA. Translation: AAM05901.1.
RefSeqiNP_617421.1. NC_003552.1.
WP_011022486.1. NC_003552.1.

Genome annotation databases

EnsemblBacteriaiAAM05901; AAM05901; MA_2518.
GeneIDi1474407.
KEGGimac:MA2518.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE010299 Genomic DNA. Translation: AAM05901.1.
RefSeqiNP_617421.1. NC_003552.1.
WP_011022486.1. NC_003552.1.

3D structure databases

ProteinModelPortaliQ8TMY0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi188937.MA2518.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM05901; AAM05901; MA_2518.
GeneIDi1474407.
KEGGimac:MA2518.

Phylogenomic databases

eggNOGiCOG0478.
InParanoidiQ8TMY0.
KOiK07179.
OMAiHREGYTN.
PhylomeDBiQ8TMY0.

Enzyme and pathway databases

BioCyciMACE188937:GI2O-2543-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR030484. Rio2.
IPR015285. RIO2_wHTH_N.
IPR018934. RIO_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10593:SF1. PTHR10593:SF1. 1 hit.
PfamiPF01163. RIO1. 1 hit.
PF09202. Rio2_N. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity."
    Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.
    , McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A., Hedderich R., Ingram-Smith C., Kuettner C.H., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.
    Genome Res. 12:532-542(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2AImported.

Entry informationi

Entry nameiQ8TMY0_METAC
AccessioniPrimary (citable) accession number: Q8TMY0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: May 27, 2015
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.