Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

MA_3428

Organism
Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA ligase (ATP) activity Source: GO_Central

GO - Biological processi

  1. DNA ligation Source: GO_Central
  2. lagging strand elongation Source: GO_Central
  3. nucleotide-excision repair Source: GO_Central
Complete GO annotation...

Enzyme and pathway databases

BioCyciMACE188937:GI2O-3470-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:MA_3428Imported
OrganismiMethanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)Imported
Taxonomic identifieri188937 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
ProteomesiUP000002487: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: GO_Central
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi188937.MA3428.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiQ8TKH7.
OMAiIETEDHP.
PhylomeDBiQ8TKH7.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8TKH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEEYAKKRD FKKTSEPPAN GVEKSSDKSS DEPVFVVQRH DATNLHYDFR
60 70 80 90 100
LELGGVLKSW AVPKEPPESA GIKRLAIQTE DHPLEYADFE GEIPEGEYGA
110 120 130 140 150
GKVEIWDKGS FELQKHNEKE IAVTLHGEKL EGDYVLIRTK YGKEGKGWLF

FRKKTD
Length:156
Mass (Da):17,812
Last modified:June 1, 2002 - v1
Checksum:i184878A5AF292852
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE010299 Genomic DNA. Translation: AAM06795.1.
RefSeqiNP_618315.1. NC_003552.1.
WP_011023353.1. NC_003552.1.

Genome annotation databases

EnsemblBacteriaiAAM06795; AAM06795; MA_3428.
GeneIDi1475321.
KEGGimac:MA3428.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE010299 Genomic DNA. Translation: AAM06795.1.
RefSeqiNP_618315.1. NC_003552.1.
WP_011023353.1. NC_003552.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi188937.MA3428.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM06795; AAM06795; MA_3428.
GeneIDi1475321.
KEGGimac:MA3428.

Phylogenomic databases

eggNOGiCOG1793.
InParanoidiQ8TKH7.
OMAiIETEDHP.
PhylomeDBiQ8TKH7.

Enzyme and pathway databases

BioCyciMACE188937:GI2O-3470-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity."
    Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W., Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J., Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.
    , McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D., Cann I., Graham D.E., Grahame D.A., Guss A., Hedderich R., Ingram-Smith C., Kuettner C.H., Krzycki J.A., Leigh J.A., Li W., Liu J., Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A., White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H., Macario A.J.L., Paulsen I., Pritchett M., Sowers K.R., Swanson R.V., Zinder S.H., Lander E., Metcalf W.W., Birren B.
    Genome Res. 12:532-542(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35395 / DSM 2834 / JCM 12185 / C2AImported.

Entry informationi

Entry nameiQ8TKH7_METAC
AccessioniPrimary (citable) accession number: Q8TKH7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: March 4, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.