Q8TGK5 (YB13A_YEAST) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative UPF0479 protein YBL113W-A

Gene names

Ordered Locus Names:

YBL113W-A

Organism

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]

Taxonomic identifier

559292 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces › Saccharomyces cerevisiae

Protein attributes

Sequence length	160 AA.
Sequence status	Complete.
Protein existence	Uncertain

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the UPF0479 family.
Caution	Product of a dubious gene prediction. Completely overlaps YBL113C.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 160	160	Putative UPF0479 protein YBL113W-A		PRO_0000299783
Regions
	Transmembrane	39 – 59	21	Helical; Potential
	Transmembrane	136 – 156	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	Q8TGK5 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: 9874192EAAB3D083	FASTA	160	18,616
	10 20 30 40 50 60 MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF FVPVQKVLQH 70 80 90 100 110 120 LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN CFSSSSNGQV PSIISLYLRV 130 140 150 160 DLSPFYAKIF QISYRVPMIW LDVFQVFFVF LIISQHSLHS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete DNA sequence of yeast chromosome II." Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C. , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K. EMBO J. 13:5795-5809(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c.
[2]	"An integrated approach for finding overlooked genes in yeast." Kumar A., Harrison P.M., Cheung K.-H., Lan N., Echols N., Bertone P., Miller P., Gerstein M.B., Snyder M. Nat. Biotechnol. 20:58-63(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	Y08934 Genomic DNA. No translation available. AF479988 Genomic DNA. Translation: AAL79301.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	4932.YBL113W-A.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblFungi	YBL113W-A; YBL113W-A; YBL113W-A.
Organism-specific databases
CYGD	YBL113w-a.
SGD	S000028599. YBL113W-A.
Phylogenomic databases
GeneTree	ENSGT00530000064646.
HOGENOM	HOG000000847.
Gene expression databases
Genevestigator	Q8TGK5.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

YB13A_YEAST

Accession

Primary (citable) accession number: Q8TGK5

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 11, 2007
Last sequence update:	June 1, 2002
Last modified:	April 3, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program