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Protein

Uncharacterized mitochondrial carrier PB17E12.12c

Gene

SPAPB17E12.12c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized mitochondrial carrier PB17E12.12c
Gene namesi
ORF Names:SPAPB17E12.12c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAPB17E12.12c.
PomBaseiSPAPB17E12.12c.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei14 – 34Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei72 – 92Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei119 – 139Helical; Name=3Sequence analysisAdd BLAST21
Transmembranei196 – 216Helical; Name=4Sequence analysisAdd BLAST21
Transmembranei230 – 250Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei291 – 307Helical; Name=6Sequence analysisAdd BLAST17

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003107991 – 317Uncharacterized mitochondrial carrier PB17E12.12cAdd BLAST317

Proteomic databases

MaxQBiQ8TFH2.
PRIDEiQ8TFH2.

Interactioni

Protein-protein interaction databases

MINTiMINT-4700950.
STRINGi4896.SPAPB17E12.12c.1.

Structurei

3D structure databases

ProteinModelPortaliQ8TFH2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati18 – 103Solcar 1Add BLAST86
Repeati113 – 217Solcar 2Add BLAST105
Repeati224 – 313Solcar 3Add BLAST90

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000165726.
InParanoidiQ8TFH2.
KOiK14684.
OMAiKMWREEG.
OrthoDBiEOG092C592A.
PhylomeDBiQ8TFH2.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiView protein in InterPro
IPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom_sf.
PfamiView protein in Pfam
PF00153. Mito_carr. 3 hits.
PRINTSiPR00926. MITOCARRIER.
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiView protein in PROSITE
PS50920. SOLCAR. 3 hits.

Sequencei

Sequence statusi: Complete.

Q8TFH2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKDKFGPCA PSRIPLLSND LISMLSGGVA ATVSRTAVSP LERMKIIFQV
60 70 80 90 100
QNNKEYTSLT STLVKIWNRE GLIGFFRGNG TNCLRAFPYG AVQFATFNML
110 120 130 140 150
KQRALKNRSH QNLENHERLL FGAIAGAASC ATTYPLDIAR TRLSIETAGL
160 170 180 190 200
TSRSLAINNV ANNSLKVKPL TLWSTLLYIV QHEGGYPALY NGLPATLLNV
210 220 230 240 250
VPYVSICFFT FEFCKQKFFS NADLTAFQKL FLGGFTGIIG QTLTFPADVL
260 270 280 290 300
RRRFQVNRIP GIGHNYKNIK SAIFHIYKTE GINGFFRGYS SNMLKIIPVM
310
SITWYTYETV SKMLHDL
Length:317
Mass (Da):35,466
Last modified:June 1, 2002 - v1
Checksum:i4589A0E694820CF9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAD27505.1.
RefSeqiNP_001018227.1. NM_001018707.2.

Genome annotation databases

EnsemblFungiiSPAPB17E12.12c.1; SPAPB17E12.12c.1:pep; SPAPB17E12.12c.
GeneIDi3361393.
KEGGispo:SPAPB17E12.12c.

Similar proteinsi

Entry informationi

Entry nameiYIKC_SCHPO
AccessioniPrimary (citable) accession number: Q8TFH2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: June 1, 2002
Last modified: November 22, 2017
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families