Q8TE73 (DYH5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 102.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Dynein heavy chain 5, axonemal Alternative name(s): Axonemal beta dynein heavy chain 5 Ciliary dynein heavy chain 5 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 4624 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles. |
| Subunit structure | Consists of at least two heavy chains and a number of intermediate and light chains. |
| Subcellular location | |
| Domain | Dynein heavy chains probably consist of an N-terminal stem (which binds cargo and interacts with other dynein components), and the head or motor domain. The motor contains six tandemly-linked AAA domains in the head, which form a ring. A stalk-like structure (formed by two of the coiled coil domains) protrudes between AAA 4 and AAA 5 and terminates in a microtubule-binding site. A seventh domain may also contribute to this ring; it is not clear whether the N-terminus or the C-terminus forms this extra domain. There are four well-conserved and two non-conserved ATPase sites, one per AAA domain. Probably only one of these (within AAA 1) actually hydrolyzes ATP, the others may serve a regulatory function. |
| Involvement in disease | Primary ciliary dyskinesia 3 (CILD3) [MIM:608644]: A disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia; reduced fertility is often observed in male patients due to abnormalities of sperm tails. Half of the patients exhibit randomization of left-right body asymmetry and situs inversus, due to dysfunction of monocilia at the embryonic node. Primary ciliary dyskinesia associated with situs inversus is referred to as Kartagener syndrome. Kartagener syndrome (KTGS) [MIM:244400]: An autosomal recessive disorder characterized by the association of primary ciliary dyskinesia with situs inversus. Clinical features include recurrent respiratory infections, bronchiectasis, infertility, and lateral transposition of the viscera of the thorax and abdomen. The situs inversus is most often total, although it can be partial in some cases (isolated dextrocardia or isolated transposition of abdominal viscera). |
| Sequence similarities | Belongs to the dynein heavy chain family. |
| Sequence caution | The sequence BAB15543.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 4624 | 4624 | Dynein heavy chain 5, axonemal | PRO_0000114630 | |||||
Regions | |||||||||
| Nucleotide binding | 1980 – 1987 | 8 | ATP Potential | ||||||
| Nucleotide binding | 2262 – 2269 | 8 | ATP Potential | ||||||
| Region | 1 – 1941 | 1941 | Stem By similarity | ||||||
| Region | 1942 – 2164 | 223 | AAA 1 By similarity | ||||||
| Region | 2224 – 2443 | 220 | AAA 2 By similarity | ||||||
| Region | 2550 – 2803 | 254 | AAA 3 By similarity | ||||||
| Region | 2916 – 3170 | 255 | AAA 4 By similarity | ||||||
| Region | 3185 – 3482 | 298 | Stalk By similarity | ||||||
| Region | 3567 – 3797 | 231 | AAA 5 By similarity | ||||||
| Region | 4012 – 4226 | 215 | AAA 6 By similarity | ||||||
| Coiled coil | 284 – 305 | 22 | Potential | ||||||
| Coiled coil | 740 – 825 | 86 | Potential | ||||||
| Coiled coil | 1435 – 1465 | 31 | Potential | ||||||
| Coiled coil | 3195 – 3302 | 108 | Potential | ||||||
| Coiled coil | 3426 – 3491 | 66 | Potential | ||||||
| Coiled coil | 3732 – 3817 | 86 | Potential | ||||||
| Coiled coil | 4392 – 4420 | 29 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 163 | 1 | Phosphoserine By similarity | ||||||
Natural variations | |||||||||
| Natural variant | 12 | 1 | H → Q. Corresponds to variant rs339445 [ dbSNP | Ensembl ]. | VAR_019603 | |||||
| Natural variant | 24 | 1 | G → E. Corresponds to variant rs1530496 [ dbSNP | Ensembl ]. | VAR_019604 | |||||
| Natural variant | 558 | 1 | T → A. Corresponds to variant rs1530498 [ dbSNP | Ensembl ]. | VAR_019605 | |||||
| Natural variant | 591 | 1 | L → R. Corresponds to variant rs35090077 [ dbSNP | Ensembl ]. | VAR_053840 | |||||
| Natural variant | 591 | 1 | L → V. Corresponds to variant rs35090077 [ dbSNP | Ensembl ]. | VAR_053841 | |||||
| Natural variant | 620 | 1 | Q → K. Corresponds to variant rs34076967 [ dbSNP | Ensembl ]. | VAR_053842 | |||||
| Natural variant | 765 | 1 | K → N. Corresponds to variant rs4701997 [ dbSNP | Ensembl ]. | VAR_053843 | |||||
| Natural variant | 766 | 1 | I → L. Corresponds to variant rs4701997 [ dbSNP | Ensembl ]. | VAR_027903 | |||||
| Natural variant | 1006 | 1 | S → G. Corresponds to variant rs16902886 [ dbSNP | Ensembl ]. | VAR_027904 | |||||
| Natural variant | 1081 | 1 | M → V. Corresponds to variant rs16902880 [ dbSNP | Ensembl ]. | VAR_027905 | |||||
| Natural variant | 1716 | 1 | R → L in CILD3. Ref.6 | VAR_030705 | |||||
| Natural variant | 2264 | 1 | S → N in CILD3. Ref.6 | VAR_030706 | |||||
| Natural variant | 2347 | 1 | E → K in CILD3. Ref.6 | VAR_030707 | |||||
| Natural variant | 2425 | 1 | R → H. Corresponds to variant rs35900306 [ dbSNP | Ensembl ]. | VAR_053844 | |||||
| Natural variant | 2463 | 1 | Q → R. Corresponds to variant rs10078391 [ dbSNP | Ensembl ]. | VAR_019606 | |||||
| Natural variant | 2501 | 1 | R → P in CILD3. Ref.6 | VAR_030708 | |||||
| Natural variant | 2843 | 1 | F → S in CILD3. Ref.6 | VAR_030709 | |||||
| Natural variant | 2862 | 1 | L → F. Corresponds to variant rs10513155 [ dbSNP | Ensembl ]. | VAR_019607 | |||||
| Natural variant | 3409 | 1 | W → S in CILD3. Ref.6 | VAR_030710 | |||||
| Natural variant | 3519 | 1 | G → R in KTGS. Ref.1 | VAR_019608 | |||||
| Natural variant | 3791 | 1 | T → I. Corresponds to variant rs17263496 [ dbSNP | Ensembl ]. | VAR_027906 | |||||
| Natural variant | 3843 | 1 | S → L in CILD3. Ref.6 | VAR_030711 | |||||
| Natural variant | 4134 | 1 | A → V. Ref.4 Corresponds to variant rs30168 [ dbSNP | Ensembl ]. | VAR_019609 | |||||
| Natural variant | 4205 | 1 | G → V in CILD3. Ref.6 | VAR_030712 | |||||
| Natural variant | 4220 | 1 | T → A. Corresponds to variant rs2277046 [ dbSNP | Ensembl ]. | VAR_019610 | |||||
| Natural variant | 4450 | 1 | I → V. Ref.4 Ref.5 Corresponds to variant rs3734110 [ dbSNP | Ensembl ]. | VAR_019611 | |||||
Experimental info | |||||||||
| Sequence conflict | 2000 | 1 | Y → D in AAC50699. Ref.3 | ||||||
| Sequence conflict | 2027 | 1 | S → A in AAL06603. Ref.2 | ||||||
| Sequence conflict | 2027 | 1 | S → A in AAC50699. Ref.3 | ||||||
| Sequence conflict | 2207 | 1 | D → N in AAL06603. Ref.2 | ||||||
| Sequence conflict | 2227 | 1 | S → N in AAL06603. Ref.2 | ||||||
| Sequence conflict | 2232 | 1 | E → K in AAL06603. Ref.2 | ||||||
| Sequence conflict | 2248 – 2250 | 3 | LFE → QTK in AAL06603. Ref.2 | ||||||
| Sequence conflict | 4429 | 1 | R → Q in BAB15543. Ref.5 | ||||||
| Sequence conflict | 4451 | 1 | S → F in BAB15543. Ref.5 | ||||||
| Sequence conflict | 4527 | 1 | A → T in BAB15543. Ref.5 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Mutations in DNAH5 cause primary ciliary dyskinesia and randomization of left-right asymmetry." Olbrich H., Haeffner K., Kispert A., Voelkel A., Volz A., Sasmaz G., Reinhardt R., Hennig S., Lehrach H., Konietzko N., Zariwala M., Noone P.G., Knowles M., Mitchison H.M., Meeks M., Chung E.M.K., Hildebrandt F., Sudbrak R., Omran H. Nat. Genet. 30:143-144(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT KTGS ARG-3519. |
| [2] | "Homozygosity mapping of a gene locus for primary ciliary dyskinesia on chromosome 5p and identification of the heavy dynein chain DNAH5 as a candidate gene." Omran H., Haeffner K., Voelkel A., Kuehr J., Ketelsen U.-P., Ross U.-H., Konietzko N., Wienker T., Brandis M., Hildebrandt F. Am. J. Respir. Cell Mol. Biol. 23:696-702(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1956-2469, INVOLVEMENT IN CILD3. Tissue: Testis. |
| [3] | "Multiple mouse chromosomal loci for dynein-based motility." Vaughan K.T., Mikami A., Paschal B.M., Holzbaur E.L.F., Hughes S.M., Echeverri C.J., Moore K.J., Gilbert D.J., Copeland N.G., Jenkins N.A., Vallee R.B. Genomics 36:29-38(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1956-2034. Tissue: Lung. |
| [4] | "Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Nakayama M., Hirosawa M., Ohara O. DNA Res. 7:273-281(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2966-4624, VARIANTS VAL-4134 AND VAL-4450. Tissue: Brain. |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 4231-4602, VARIANT VAL-4450. Tissue: Lung. |
| [6] | "DNAH5 mutations are a common cause of primary ciliary dyskinesia with outer dynein arm defects." Hornef N., Olbrich H., Horvath J., Zariwala M.A., Fliegauf M., Loges N.T., Wildhaber J., Noone P.G., Kennedy M., Antonarakis S.E., Blouin J.-L., Bartoloni L., Nuesslein T., Ahrens P., Griese M., Kuhl H., Sudbrak R., Knowles M.R., Reinhardt R., Omran H. Am. J. Respir. Crit. Care Med. 174:120-126(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CILD3 LEU-1716; ASN-2264; LYS-2347; PRO-2501; SER-2843; SER-3409; LEU-3843 AND VAL-4205. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY045575 mRNA. Translation: AAK92217.1. AY049075 mRNA. Translation: AAL06603.1. U61735 mRNA. Translation: AAC50699.1. AB046823 mRNA. Translation: BAB13429.2. AK026756 mRNA. Translation: BAB15543.1. Different initiation. |
| IPI | IPI00152653. |
| RefSeq | NP_001360.1. NM_001369.2. |
| UniGene | Hs.212360. |
3D structure databases | |
| ProteinModelPortal | Q8TE73. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000265104. |
PTM databases | |
| PhosphoSite | Q8TE73. |
Polymorphism databases | |
| DMDM | 116241343. |
Proteomic databases | |
| PaxDb | Q8TE73. |
| PeptideAtlas | Q8TE73. |
| PRIDE | Q8TE73. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000265104; ENSP00000265104; ENSG00000039139. |
| GeneID | 1767. |
| KEGG | hsa:1767. |
| UCSC | uc003jfd.2. human. |
Organism-specific databases | |
| CTD | 1767. |
| GeneCards | GC05M013745. |
| HGNC | HGNC:2950. DNAH5. |
| HPA | HPA037469. HPA037470. |
| MIM | 244400. phenotype. 603335. gene. 608644. phenotype. |
| neXtProt | NX_Q8TE73. |
| Orphanet | 244. Primary ciliary dyskinesia. |
| PharmGKB | PA27403. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5245. |
| HOGENOM | HOG000257779. |
| HOVERGEN | HBG005543. |
| InParanoid | Q8TE73. |
| OMA | DLIEFRI. |
| OrthoDB | EOG4DNF3G. |
| PhylomeDB | Q8TE73. |
Gene expression databases | |
| ArrayExpress | Q8TE73. |
| Bgee | Q8TE73. |
| CleanEx | HS_DNAH5. |
| Genevestigator | Q8TE73. |
| GermOnline | ENSG00000039139. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR003593. AAA+_ATPase. IPR011704. ATPase_dyneun-rel_AAA. IPR026983. DHC_fam. IPR026978. DNAH5. IPR024743. Dynein_HC_stalk. IPR024317. Dynein_heavy_chain_D4_dom. IPR004273. Dynein_heavy_dom. IPR013594. Dynein_heavy_dom-1. IPR013602. Dynein_heavy_dom-2. [Graphical view] |
| PANTHER | PTHR10676. PTHR10676. 1 hit. PTHR10676:SF128. PTHR10676:SF128. 1 hit. |
| Pfam | PF07728. AAA_5. 1 hit. PF12780. AAA_8. 1 hit. PF08385. DHC_N1. 1 hit. PF08393. DHC_N2. 1 hit. PF03028. Dynein_heavy. 1 hit. PF12777. MT. 1 hit. [Graphical view] |
| SMART | SM00382. AAA. 3 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 1767. |
| NextBio | 7195. |
| SOURCE | Search... |
Entry information
| Entry name | DYH5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8TE73 Secondary accession number(s): Q92860 Q9HCG9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 5 Human chromosome 5: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
