Q8TE57 (ATS16_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 102.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: A disintegrin and metalloproteinase with thrombospondin motifs 16 Short name=ADAM-TS 16 Short name=ADAM-TS16 Short name=ADAMTS-16 EC=3.4.24.- | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1224 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Cofactor | Binds 1 zinc ion per subunit By similarity. |
| Subcellular location | Secreted › extracellular space › extracellular matrix By similarity. |
| Tissue specificity | Expressed in fetal lung and kidney and in adult prostate and ovary. |
| Domain | The spacer domain and the TSP type-1 domains are important for a tight interaction with the extracellular matrix By similarity. The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme. |
| Post-translational modification | The precursor is cleaved by a furin endopeptidase By similarity. Glycosylated. Can be O-fucosylated by POFUT2 on a serine or a threonine residue found within the consensus sequence C1-X(2)-(S/T)-C2-G of the TSP type-1 repeat domains where C1 and C2 are the first and second cysteine residue of the repeat, respectively. Fucosylated repeats can then be further glycosylated by the addition of a beta-1,3-glucose residue by the glucosyltransferase, B3GALTL. Fucosylation mediates the efficient secretion of ADAMTS family members. Also can be C-glycosylated with one or two mannose molecules on tryptophan residues within the consensus sequence W-X-X-W of the TPRs, and N-glycosylated. These other glycosylations can also facilitate secretion By similarity. |
| Sequence similarities | Contains 1 disintegrin domain. Contains 1 peptidase M12B domain. Contains 1 PLAC domain. Contains 6 TSP type-1 domains. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Extracellular matrix Secreted |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Repeat Signal |
| Ligand | Metal-binding Zinc |
| Molecular function | Hydrolase Metalloprotease Protease |
| PTM | Cleavage on pair of basic residues Disulfide bond Glycoprotein Zymogen |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | proteolysis Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | proteinaceous extracellular matrix Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro zinc ion bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8TE57-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8TE57-2) The sequence of this isoform differs from the canonical sequence as follows: 1063-1072: CSVTCERGTQ → VGALVSRERG 1073-1224: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 24 | 24 | Potential | ||||||||
| Propeptide | 25 – 279 | 255 | By similarity | PRO_0000029194 | |||||||
| Chain | 280 – 1224 | 945 | A disintegrin and metalloproteinase with thrombospondin motifs 16 | PRO_0000029195 | |||||||
Regions | |||||||||||
| Domain | 290 – 495 | 206 | Peptidase M12B | ||||||||
| Domain | 496 – 585 | 90 | Disintegrin | ||||||||
| Domain | 586 – 641 | 56 | TSP type-1 1 | ||||||||
| Domain | 874 – 922 | 49 | TSP type-1 2 | ||||||||
| Domain | 927 – 987 | 61 | TSP type-1 3 | ||||||||
| Domain | 988 – 1048 | 61 | TSP type-1 4 | ||||||||
| Domain | 1051 – 1115 | 65 | TSP type-1 5 | ||||||||
| Domain | 1127 – 1181 | 55 | TSP type-1 6 | ||||||||
| Domain | 1186 – 1223 | 38 | PLAC | ||||||||
| Region | 747 – 873 | 127 | Spacer | ||||||||
| Motif | 247 – 254 | 8 | Cysteine switch By similarity | ||||||||
| Compositional bias | 642 – 746 | 105 | Cys-rich | ||||||||
Sites | |||||||||||
| Active site | 434 | 1 | By similarity | ||||||||
| Metal binding | 249 | 1 | Zinc; in inhibited form By similarity | ||||||||
| Metal binding | 433 | 1 | Zinc; catalytic By similarity | ||||||||
| Metal binding | 437 | 1 | Zinc; catalytic By similarity | ||||||||
| Metal binding | 443 | 1 | Zinc; catalytic By similarity | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 156 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 310 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 741 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 780 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 835 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 905 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 935 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 411 ↔ 490 | By similarity | |||||||||
| Disulfide bond | 450 ↔ 474 | By similarity | |||||||||
| Disulfide bond | 598 ↔ 635 | By similarity | |||||||||
| Disulfide bond | 602 ↔ 640 | By similarity | |||||||||
| Disulfide bond | 613 ↔ 625 | By similarity | |||||||||
| Disulfide bond | 939 ↔ 981 | By similarity | |||||||||
| Disulfide bond | 943 ↔ 986 | By similarity | |||||||||
| Disulfide bond | 954 ↔ 970 | By similarity | |||||||||
Natural variations | |||||||||||
| Alternative sequence | 1063 – 1072 | 10 | CSVTCERGTQ → VGALVSRERG in isoform 2. | VSP_007664 | |||||||
| Alternative sequence | 1073 – 1224 | 152 | Missing in isoform 2. | VSP_007665 | |||||||
| Natural variant | 110 | 1 | M → V. Corresponds to variant rs1863968 [ dbSNP | Ensembl ]. | VAR_057076 | |||||||
| Natural variant | 486 | 1 | A → T. Corresponds to variant rs16875054 [ dbSNP | Ensembl ]. | VAR_057077 | |||||||
| Natural variant | 789 | 1 | R → C. Corresponds to variant rs9313105 [ dbSNP | Ensembl ]. | VAR_057078 | |||||||
| Natural variant | 859 | 1 | R → L. Corresponds to variant rs16875122 [ dbSNP | Ensembl ]. | VAR_057079 | |||||||
| Natural variant | 863 | 1 | E → K. Corresponds to variant rs35394775 [ dbSNP | Ensembl ]. | VAR_057080 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 90 | 1 | P → A in CAC86015. Ref.1 | ||||||||
| Sequence conflict | 104 | 1 | S → P in CAC86015. Ref.1 | ||||||||
| Sequence conflict | 284 | 1 | S → Y in BAC23125. Ref.4 | ||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning, expression analysis, and structural characterization of seven novel human ADAMTSs, a family of metalloproteinases with disintegrin and thrombospondin-1 domains." Cal S., Obaya A.J., Llamazares M., Garabaya C., Quesada V., Lopez-Otin C. Gene 283:49-62(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). |
| [2] | NHLBI resequencing and genotyping service (RS&G) Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "The DNA sequence and comparative analysis of human chromosome 5." Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S. Rubin E.M.Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The nucleotide sequence of a long cDNA clone isolated from human." Nagase T., Kikuno R., Ohara O. Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 204-1224 (ISOFORM 1). Tissue: Brain. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AJ315734 mRNA. Translation: CAC86015.1. FJ515844 Genomic DNA. Translation: ACS13738.1. AC010269 Genomic DNA. No translation available. AC022424 Genomic DNA. No translation available. AC091978 Genomic DNA. No translation available. AB095949 mRNA. Translation: BAC23125.1. |
| IPI | IPI00186114. IPI00386697. |
| RefSeq | NP_620687.2. NM_139056.2. |
| UniGene | Hs.661915. |
3D structure databases | |
| ProteinModelPortal | Q8TE57. |
| SMR | Q8TE57. Positions 292-860, 866-1050. |
| ModBase | Search... |
Protein family/group databases | |
| MEROPS | M12.026. |
PTM databases | |
| PhosphoSite | Q8TE57. |
Polymorphism databases | |
| DMDM | 296439429. |
Proteomic databases | |
| PaxDb | Q8TE57. |
| PRIDE | Q8TE57. |
Protocols and materials databases | |
| DNASU | 170690. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000274181; ENSP00000274181; ENSG00000145536. |
| GeneID | 170690. |
| KEGG | hsa:170690. |
| UCSC | uc003jdk.1. human. uc003jdl.3. human. |
Organism-specific databases | |
| CTD | 170690. |
| GeneCards | GC05P005140. |
| HGNC | HGNC:17108. ADAMTS16. |
| MIM | 607510. gene. |
| neXtProt | NX_Q8TE57. |
| PharmGKB | PA24542. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG237764. |
| HOGENOM | HOG000004800. |
| HOVERGEN | HBG004315. |
| InParanoid | Q8TE57. |
| KO | K08630. |
| OMA | EDQDLCK. |
| OrthoDB | EOG4DNF3K. |
| PhylomeDB | Q8TE57. |
Gene expression databases | |
| ArrayExpress | Q8TE57. |
| Bgee | Q8TE57. |
| CleanEx | HS_ADAMTS16. |
| Genevestigator | Q8TE57. |
| GermOnline | ENSG00000145536. Homo sapiens. |
Family and domain databases | |
| Gene3D | 3.40.390.10. 1 hit. |
| InterPro | IPR010294. ADAM_spacer1. IPR024079. MetalloPept_cat_dom. IPR001590. Peptidase_M12B. IPR013273. Peptidase_M12B_ADAM-TS. IPR002870. Peptidase_M12B_N. IPR010909. PLAC. IPR000884. Thrombospondin_1_rpt. [Graphical view] |
| Pfam | PF05986. ADAM_spacer1. 1 hit. PF01562. Pep_M12B_propep. 1 hit. PF08686. PLAC. 1 hit. PF01421. Reprolysin. 1 hit. PF00090. TSP_1. 5 hits. [Graphical view] |
| PRINTS | PR01857. ADAMTSFAMILY. |
| SMART | SM00209. TSP1. 6 hits. [Graphical view] |
| SUPFAM | SSF82895. TSP1. 5 hits. |
| PROSITE | PS50215. ADAM_MEPRO. 1 hit. PS00546. CYSTEINE_SWITCH. False negative. PS00427. DISINTEGRIN_1. False negative. PS50214. DISINTEGRIN_2. False negative. PS50900. PLAC. 1 hit. PS50092. TSP1. 5 hits. PS00142. ZINC_PROTEASE. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 170690. |
| NextBio | 89102. |
| SOURCE | Search... |
Entry information
| Entry name | ATS16_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8TE57 Secondary accession number(s): C6G490, Q8IVE2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Peptidase families Classification of peptidase families and list of entries |
| Human chromosome 5 Human chromosome 5: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
