Q8TBH0 (ARRD2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 67.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Arrestin domain-containing protein 2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 407 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Belongs to the arrestin family. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q8TBH0-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q8TBH0-2) The sequence of this isoform differs from the canonical sequence as follows: 1-91: MLFDKVKAFS...VSHRATLLAP → MRSGGVRSFA...YLRRRQLLLR |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 407 | 407 | Arrestin domain-containing protein 2 | PRO_0000244347 | |||||
Natural variations | |||||||||
| Alternative sequence | 1 – 91 | 91 | MLFDK…TLLAP → MRSGGVRSFALELARGPGGA YRGGERLCGRVLLEAAAPLR VRALEVKARGGAATHWLEGR SVGVNAVSSDYAAAETYLRR RQLLLR in isoform 2. | VSP_019544 | |||||
| Natural variant | 181 | 1 | R → H. Ref.4 Corresponds to variant rs17852061 [ dbSNP | Ensembl ]. | VAR_026895 | |||||
| Natural variant | 192 | 1 | R → H. Ref.4 Corresponds to variant rs17852062 [ dbSNP | Ensembl ]. | VAR_026896 | |||||
| Natural variant | 244 | 1 | A → T. Corresponds to variant rs8110271 [ dbSNP | Ensembl ]. | VAR_026897 | |||||
| Natural variant | 396 | 1 | L → P. Ref.4 Corresponds to variant rs7259041 [ dbSNP | Ensembl ]. | VAR_026898 | |||||
Sequences
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References
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Tissue: Synovial cell and Tongue. |
| [2] | "Large-scale cDNA transfection screening for genes related to cancer development and progression." Wan D., Gong Y., Qin W., Zhang P., Li J., Wei L., Zhou X., Li H., Qiu X., Zhong F., He L., Yu J., Yao G., Jiang H., Qian L., Yu Y., Shu H., Chen X. Gu J.Proc. Natl. Acad. Sci. U.S.A. 101:15724-15729(2004) [PubMed: 15498874] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANTS HIS-181; HIS-192 AND PRO-396. Tissue: Brain. |
| [5] | Mei G., Yu W., Gibbs R.A. Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 110-407. Tissue: Brain. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AK127940 mRNA. Translation: BAC87200.1. AK314657 mRNA. Translation: BAG37216.1. AF193051 mRNA. Translation: AAG22479.1. CH471106 Genomic DNA. Translation: EAW84650.1. BC022516 mRNA. Translation: AAH22516.1. AF131826 mRNA. Translation: AAD20053.1. |
| IPI | IPI00328155. IPI00619906. |
| RefSeq | NP_001020775.1. NM_001025604.1. NP_056498.1. NM_015683.1. |
| UniGene | Hs.515249. |
3D structure databases | |
| ProteinModelPortal | Q8TBH0. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8TBH0. |
PTM databases | |
| PhosphoSite | Q8TBH0. |
Polymorphism databases | |
| DMDM | 109940307. |
Proteomic databases | |
| PRIDE | Q8TBH0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000222250; ENSP00000222250; ENSG00000105643. |
| GeneID | 27106. |
| KEGG | hsa:27106. |
| UCSC | uc002nhu.1. human. uc002nhv.1. human. |
Organism-specific databases | |
| CTD | 27106. |
| GeneCards | GC19P018111. |
| HGNC | HGNC:25225. ARRDC2. |
| neXtProt | NX_Q8TBH0. |
| PharmGKB | PA134945141. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG12127. |
| GeneTree | ENSGT00550000074356. |
| HOGENOM | HBG714698. |
| HOVERGEN | HBG066469. |
| InParanoid | Q8TBH0. |
| OMA | YTQSYSE. |
| PhylomeDB | Q8TBH0. |
Gene expression databases | |
| ArrayExpress | Q8TBH0. |
| Bgee | Q8TBH0. |
| CleanEx | HS_ARRDC2. |
| Genevestigator | Q8TBH0. |
| GermOnline | ENSG00000105643. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011021. Arrestin-like_N. IPR011022. Arrestin_C-like. IPR014756. Ig_E-set. [Graphical view] |
| Pfam | PF02752. Arrestin_C. 1 hit. PF00339. Arrestin_N. 1 hit. [Graphical view] |
| SMART | SM01017. Arrestin_C. 1 hit. [Graphical view] |
| SUPFAM | SSF81296. Ig_E-set. 2 hits. |
| ProtoNet | Search... |
Other | |
| NextBio | 49768. |
Entry information
| Entry name | ARRD2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8TBH0 Secondary accession number(s): B2RBG9 Q8WYG6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with