Q8T9L6 (Q8T9L6_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CG13900, isoform B EMBL AAN11452.1

Submitted name:
GM01240p EMBL AAL39384.1

Gene names

ORF Names:

CG13900 EMBL AAL39384.1 FlyBase FBgn0035162, Dmel_CG13900 EMBL AAN11452.1

Organism

Drosophila melanogaster (Fruit fly) EMBL AAL39384.1

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	688 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	mitotic spindle organization Inferred from mutant phenotype. Source: FlyBase nuclear mRNA splicing, via spliceosome Inferred by curator. Source: FlyBase
Cellular component	catalytic step 2 spliceosome Inferred from direct assay. Source: FlyBase precatalytic spliceosome Inferred from direct assay. Source: FlyBase
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8T9L6 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: D606D0DFACC387E6	FASTA	688	76,979
	10 20 30 40 50 60 MCPAVLSFKI NQKPYPRLLN FTTNEYILCL QTGELNEYTE RSEMPAEIMC MALGTVPEGE 70 80 90 100 110 120 QRSWFLAVGL ADNTVRILSL DPNNCLTPCS MQALPSPAES LCLVEMGHTE STTQGGLDDD 130 140 150 160 170 180 APAQRSGNNK GTIYLNIGLS NGVLLRTVLD PVSGDLADTR TRYLGSRPVK LFRIKMQGSE 190 200 210 220 230 240 AVLAMSSRTW LSYYHQNRFH LTPLSYETLE YASGFSSEQC SEGIVAISTN TLRILALEKL 250 260 270 280 290 300 GAVFNQVAFP LQYTPRTFVI HPDTGRMLIA ETDHNAYTED TKSARKEQMA EEMRSAAGDE 310 320 330 340 350 360 ERELAREMAN AFINEVLPED VFSSPKAGLG LWASQIRCLD AMHGQTMFSV PLTQNEAIMS 370 380 390 400 410 420 MAMLKFSIAA DGRYYLAVGI AKDLQLNPRI SQGGCIDIYK IDPTCSSLEF MHRTDIDEIP 430 440 450 460 470 480 GALCGFQGRL LAGCGRMLRI YDFGKKKMLR KCENKHIPYQ IVNIQAMGHR VYVSDVQESV 490 500 510 520 530 540 FFIRYRRAEN QLIIFADDTH PRWVTATTLL DYDTIAIADK FGNLSIQRLP HSVTDDVDED 550 560 570 580 590 600 PTGTKSLWDR GLLSGASQKS ENICSFHVGE IIMSLQKATL IPGGSEALIY ATLSGTVGAF 610 620 630 640 650 660 VPFTSREDYD FFQHLEMHMR NENPPLCGRD HLSYRSSYYP VKNVLDGDLC EQYLSIEAAK 670 680 QKSIAGDMFR TPNQICKKLE DIRTRYAF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley.
[3]	Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S. Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY069239 mRNA. Translation: AAL39384.1. AE014296 Genomic DNA. Translation: AAN11452.1.
RefSeq	NP_612059.1. NM_138215.2.
UniGene	Dm.7679.
3D structure databases
ProteinModelPortal	Q8T9L6.
SMR	Q8T9L6. Positions 426-452.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q8T9L6. 24 interactions.
STRING	Q8T9L6.
Proteomic databases
PRIDE	Q8T9L6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0072598; FBpp0072495; FBgn0035162.
GeneID	38093.
KEGG	dme:Dmel_CG13900.
NMPDR	fig|7227.3.peg.4283.
UCSC	CG13900-RB. d. melanogaster.
Organism-specific databases
FlyBase	FBgn0035162. CG13900.
Phylogenomic databases
GeneTree	EMGT00050000015936.
InParanoid	Q8T9L6.
PhylomeDB	Q8T9L6.
Gene expression databases
ArrayExpress	Q8T9L6.
Bgee	Q8T9L6.
Family and domain databases
InterPro	IPR004871. Cleavage/polyA-sp_fac_asu_C. [Graphical view]
KO	K12830.
Pfam	PF03178. CPSF_A. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	806961.

Entry information

Entry name

Q8T9L6_DROME

Accession

Primary (citable) accession number: Q8T9L6

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	January 25, 2012
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)