Q8T8A7 (Q8T8A7_CIOIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamic acid decarboxylase EMBL BAB88854.1

Gene names

Name:

Ci-GAD EMBL BAB88854.1

Organism

Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis) EMBL BAB88854.1

Taxonomic identifier

7719 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Tunicata › Ascidiacea › Enterogona › Phlebobranchia › Cionidae › Ciona

Protein attributes

Sequence length	531 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8T8A7 [UniParc]. Last modified June 1, 2002. Version 1. Checksum: AFD16187EDFACC6B	FASTA	531	60,719
	10 20 30 40 50 60 MQKQSAWRFR SSSVGLIKVE PNNDDYSMNN GDFENSSSAD LLPFGKSDEK TQLFLKEIFE 70 80 90 100 110 120 ILLKYISKSF DRKCKILDFH HPHQLLEGIE GFSLNINGEA ESLEQILVDC RDTLKYGVKT 130 140 150 160 170 180 GHPRFFNQLS SGLDIVSLAA DWVTSTANTN MFTFEIAPVF ILMEDVIIKR MMKIIGWENI 190 200 210 220 230 240 DGIFSPGGSI NNLYSVMLAR HKIMPDVKHS GLRGFPQLVM FQSKHAHYSN KRPAAILGIG 250 260 270 280 290 300 LNNCIDIEVD ERGHMKPEDL ELKILQSKLD GKVPFYVTAT AGTTVRGAFD EIVKISEVCK 310 320 330 340 350 360 KYKIWLHVDA AWGGAVMMSQ KHRHLVAGIE MSDSVTWNPH KMVGVVLQCS MLLTKHKRLL 370 380 390 400 410 420 ESCNNMRADY LFQQDKHYDI TYDTGDKTIQ CGRHVDVFKL WLSWRAKGDK GFCHHVERCI 430 440 450 460 470 480 ELARYLVRKI KKTPGFQLVF QEPEYSNVCF WYYPPSIRNI CDEVIKNEKL GKVAPIIKSR 490 500 510 520 530 MMERGSIMIG YQPLGSKVNF FRCVISNCAV NYDDIDFMVG QIERLGHDID M

References

[1]	"Neural map of the larval central nervous system in the ascidian Ciona intestinalis." Takamura K., Minamida N., Okabe S. Zool. Sci. 27:191-203(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB072597 mRNA. Translation: BAB88854.1.
RefSeq	NP_001027785.1. NM_001032613.1.
UniGene	Cin.34157.
3D structure databases
ProteinModelPortal	Q8T8A7.
SMR	Q8T8A7. Positions 32-528.
ModBase	Search...
Protein-protein interaction databases
STRING	7719.ENSCINP00000004013.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	448951.
KEGG	cin:448951.
Organism-specific databases
CTD	445791.
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000005382.
HOVERGEN	HBG004980.
InParanoid	Q8T8A7.
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR021115. Pyridoxal-P_BS. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8T8A7_CIOIN

Accession

Primary (citable) accession number: Q8T8A7

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 2002
Last sequence update:	June 1, 2002
Last modified:	April 3, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)