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Q8T8A7 (Q8T8A7_CIOIN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Ci-GAD EMBL BAB88854.1
OrganismCiona intestinalis (Transparent sea squirt) (Ascidia intestinalis) EMBL BAB88854.1
Taxonomic identifier7719 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona

Protein attributes

Sequence length531 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q8T8A7 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: AFD16187EDFACC6B

FASTA53160,719
        10         20         30         40         50         60 
MQKQSAWRFR SSSVGLIKVE PNNDDYSMNN GDFENSSSAD LLPFGKSDEK TQLFLKEIFE 

        70         80         90        100        110        120 
ILLKYISKSF DRKCKILDFH HPHQLLEGIE GFSLNINGEA ESLEQILVDC RDTLKYGVKT 

       130        140        150        160        170        180 
GHPRFFNQLS SGLDIVSLAA DWVTSTANTN MFTFEIAPVF ILMEDVIIKR MMKIIGWENI 

       190        200        210        220        230        240 
DGIFSPGGSI NNLYSVMLAR HKIMPDVKHS GLRGFPQLVM FQSKHAHYSN KRPAAILGIG 

       250        260        270        280        290        300 
LNNCIDIEVD ERGHMKPEDL ELKILQSKLD GKVPFYVTAT AGTTVRGAFD EIVKISEVCK 

       310        320        330        340        350        360 
KYKIWLHVDA AWGGAVMMSQ KHRHLVAGIE MSDSVTWNPH KMVGVVLQCS MLLTKHKRLL 

       370        380        390        400        410        420 
ESCNNMRADY LFQQDKHYDI TYDTGDKTIQ CGRHVDVFKL WLSWRAKGDK GFCHHVERCI 

       430        440        450        460        470        480 
ELARYLVRKI KKTPGFQLVF QEPEYSNVCF WYYPPSIRNI CDEVIKNEKL GKVAPIIKSR 

       490        500        510        520        530 
MMERGSIMIG YQPLGSKVNF FRCVISNCAV NYDDIDFMVG QIERLGHDID M 

« Hide

References

[1]"Neural map of the larval central nervous system in the ascidian Ciona intestinalis."
Takamura K., Minamida N., Okabe S.
Zool. Sci. 27:191-203(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB072597 mRNA. Translation: BAB88854.1.
RefSeqNP_001027785.1. NM_001032613.1.
UniGeneCin.34157.

3D structure databases

ProteinModelPortalQ8T8A7.
SMRQ8T8A7. Positions 32-528.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7719.ENSCINP00000004013.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID448951.
KEGGcin:448951.

Organism-specific databases

CTD445791.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000005382.
HOVERGENHBG004980.
InParanoidQ8T8A7.
KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8T8A7_CIOIN
AccessionPrimary (citable) accession number: Q8T8A7
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: October 16, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)