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Protein

Dynein light chain 1, axonemal

Gene

DNAL1

Organism
Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Dynein light chain 1, axonemal
Alternative name(s):
Leucine-rich repeat dynein light chain
Gene namesi
Name:DNAL1
Synonyms:LRR-DLC
OrganismiCiona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Taxonomic identifieri7719 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona
Proteomesi
  • UP000008144 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002811351 – 190Dynein light chain 1, axonemalAdd BLAST190

Interactioni

Protein-protein interaction databases

STRINGi7719.ENSCINP00000011761.

Structurei

3D structure databases

ProteinModelPortaliQ8T888.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati49 – 70LRR 1Add BLAST22
Repeati71 – 92LRR 2Add BLAST22
Repeati94 – 115LRR 3Add BLAST22
Repeati116 – 137LRR 4Add BLAST22
Domaini150 – 190LRRCTAdd BLAST41

Sequence similaritiesi

Belongs to the dynein light chain LC1-type family.Curated
Contains 4 LRR (leucine-rich) repeats.Curated
Contains 1 LRRCT domain.Curated

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiKOG0531. Eukaryota.
COG4886. LUCA.
GeneTreeiENSGT00390000016904.
HOGENOMiHOG000230603.
HOVERGENiHBG081457.
InParanoidiQ8T888.
KOiK10411.
OMAiKWEEKNG.
OrthoDBiEOG091G0P8H.
TreeFamiTF323974.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
PROSITEiPS51450. LRR. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8T888-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKGTSIKEA LSKWEEKNSE KAAEAKEVKL YQMLPPIEKM DASLSTLTVC
60 70 80 90 100
EKLSLSTNCI EKIANLNGLK NLKILSLGRN NIKNLNGLEA VGDSLEELWI
110 120 130 140 150
SYNSIEKLKG IHVLKKLKVL LMSNNQVKDW GEFNKLQELP VLMELVFVGN
160 170 180 190
PLEEKHSAEG DWQDRVTKSL KALKKLDGTP IIKNDEEEED
Length:190
Mass (Da):21,406
Last modified:June 1, 2002 - v1
Checksum:i43A2374AFE92EADA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB080948 mRNA. Translation: BAB85851.1.
RefSeqiNP_001027642.1. NM_001032470.1.
UniGeneiCin.14200.

Genome annotation databases

EnsembliENSCINT00000011761; ENSCINP00000011761; ENSCING00000005688.
GeneIDi445644.
KEGGicin:445644.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB080948 mRNA. Translation: BAB85851.1.
RefSeqiNP_001027642.1. NM_001032470.1.
UniGeneiCin.14200.

3D structure databases

ProteinModelPortaliQ8T888.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7719.ENSCINP00000011761.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSCINT00000011761; ENSCINP00000011761; ENSCING00000005688.
GeneIDi445644.
KEGGicin:445644.

Organism-specific databases

CTDi83544.

Phylogenomic databases

eggNOGiKOG0531. Eukaryota.
COG4886. LUCA.
GeneTreeiENSGT00390000016904.
HOGENOMiHOG000230603.
HOVERGENiHBG081457.
InParanoidiQ8T888.
KOiK10411.
OMAiKWEEKNG.
OrthoDBiEOG091G0P8H.
TreeFamiTF323974.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
PROSITEiPS51450. LRR. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiDNAL1_CIOIN
AccessioniPrimary (citable) accession number: Q8T888
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: June 1, 2002
Last modified: October 5, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.