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Reviewed, UniProtKB/Swiss-Prot Q8T6J0 (ABCA7_DICDI)

Last modified November 24, 2009. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    ABC transporter A family member 7
Alternative name(s):
    ABC transporter ABCA.7
Gene names
Name: abcA7
ORF Names: DDB_G0271140
OrganismDictyostelium discoideum (Slime mold) [Complete proteome]
Taxonomic identifier44689 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length839 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the ABC transporter superfamily. ABCA family.

Contains 1 ABC transporter domain.

Ontologies

Keywords
   Biological processTransport
   Cellular componentMembrane
   DomainTransmembrane
   LigandATP-binding
Nucleotide-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtransport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ATPase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 839839ABC transporter A family member 7
PRO_0000363839

Regions

Transmembrane30 – 5021 Potential
Transmembrane238 – 25821 Potential
Transmembrane286 – 30621 Potential
Transmembrane321 – 34121 Potential
Transmembrane352 – 37221 Potential
Transmembrane378 – 39821 Potential
Transmembrane419 – 43921 Potential
Domain525 – 756232ABC transporter
Nucleotide binding559 – 5668ATP Potential
Compositional bias495 – 4995Poly-Asp

Sequences

Sequence LengthMass (Da)Tools
Q8T6J0-1 [UniParc].

Last modified June 1, 2002. Version 1.
Checksum: 8CF4B6F2AD1EBF23

FASTA83995,309
        10         20         30         40         50         60 
MKYNANTSNQ FRAMFFKNAT FLKRQKCSLG VQIAIPMALV IVLVILKLWI ESQIENNSGP 

        70         80         90        100        110        120 
VGDSSGDDIM GSYISYKFDY MQGWFYTINP NNITNIGYKD GYGNGTGLLG GINQYEIYWN 

       130        140        150        160        170        180 
GSDLWVPYTV AVESGQKMND MVLAQKQQLG QSSMGPLTFP IAGIQFNEFN PQNNLIDLTI 

       190        200        210        220        230        240 
TCEQQIRYAY NNFENNLIYV LSQIQTSFIN YLLNGNGVVV KTQISTLPYI YKSQQFDIAS 

       250        260        270        280        290        300 
LLGGSFFPFA LSFVLPLFMY SIVYEKQEKL RDLSLMMGLK MRNYWIMTFI FNFLTYVVIV 

       310        320        330        340        350        360 
SVISLICSAA KVSLFVKGSP FALFLLLFLW GLSMVSFAFF LSTFFKRTRA ASIFGYFFVM 

       370        380        390        400        410        420 
VMVNLNSTLS LFNTSVPVFY YWVPILAFSR GISTLCGLCG NGLCPPLSQY TWDFELSRIL 

       430        440        450        460        470        480 
FWLFIDTIVY LTLAVYLDKV LPREFGVPSH PLFFIKDLKE LFSKKGKYRK LRDGDGINEK 

       490        500        510        520        530        540 
TKLINEYTID GINNDDDDDG LMDEDVKKER DMIVKGEYNP EEMTLIVQGL RKQFPGRPKP 

       550        560        570        580        590        600 
ALSNLYLSVK KGEVLGYLGP NGAGKTTSIS ILTGLYTPTS GTAHIAGLDI RYDMDKIHQV 

       610        620        630        640        650        660 
IGVVMQFDVL WEDLTCEETI LYYTRLKGTP KSIEFESTHN ILKEVNLLDV KDRFVKELSG 

       670        680        690        700        710        720 
GMKRRLSFAI AMTGESSIIF LDEPTTGLSI ETRKDLWGTI NELKKNRSII LTTHSMQEAD 

       730        740        750        760        770        780 
ILSDRIAIVS QGKLQCIGTQ THLKQKFGDG YSVRIDIQED YQNTHNPTDL IKSFSPSATL 

       790        800        810        820        830 
SETFNGSYVY RLPKDSIISD LYEYLVLNKE QYHLQEWSLS QTSLEDVFLK ISANDDTVN 

« Hide

References

« Hide 'large scale' references
[1]"Evolutionary analyses of ABC transporters of Dictyostelium discoideum."
Anjard C., Loomis W.F.
Eukaryot. Cell 1:643-652(2002) [PubMed: 12456012] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], NOMENCLATURE.
Strain: AX4.
[2]"Sequence and analysis of chromosome 2 of Dictyostelium discoideum."
Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T., Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R., Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A., Noegel A.A.
Nature 418:79-85(2002) [PubMed: 12097910] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.
[3]"The genome of the social amoeba Dictyostelium discoideum."
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. expand/collapse author list , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
Nature 435:43-57(2005) [PubMed: 15875012] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.

Cross-references

Sequence databases

AF465309 Genomic DNA. Translation: AAL85300.1.
AAFI02000006 Genomic DNA. Translation: EAL71700.1.
RefSeqXP_645693.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3396772.
GenomeReviewsGene locus abcA7 in contig CM000151_GR.
KEGGddi:DDB_0215337.

Organism-specific databases

dictyBaseDDB_G0271140. abcA7.

Phylogenomic databases

OMARIGIIAN

Family and domain databases

InterProIPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR003593. ATPase_AAA+_core.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameABCA7_DICDI
AccessionPrimary (citable) accession number: Q8T6J0
Secondary accession number(s): Q55BB9
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: June 1, 2002
Last modified: November 24, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

Dictyostelium discoideum

Dictyostelium discoideum: entries, gene names and cross-references to dictyBase

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents