Reviewed,
UniProtKB/Swiss-Prot Q8T664 (ABCH2_DICDI)
Last modified
November 24, 2009.
Version 52.
History...
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90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: ABC transporter H family member 2 | ||||
| Gene names |
| ||||
| Organism | Dictyostelium discoideum (Slime mold) [Complete proteome] | ||||
| Taxonomic identifier | 44689 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Amoebozoa › Mycetozoa › Dictyosteliida › Dictyostelium |
Protein attributes
| Sequence length | 513 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Sequence similarities | Belongs to the ABC transporter superfamily. Contains 1 ABC transporter domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transport |
| Ligand | ATP-binding Nucleotide-binding |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 513 | 513 | ABC transporter H family member 2 | PRO_0000346861 | |||||
Regions | |||||||||
| Domain | 39 – 280 | 242 | ABC transporter | ||||||
| Nucleotide binding | 75 – 82 | 8 | ATP Potential | ||||||
| Compositional bias | 326 – 348 | 23 | Poly-Asn | ||||||
| Compositional bias | 387 – 444 | 58 | Poly-Asn | ||||||
| Compositional bias | 448 – 454 | 7 | Poly-Asn | ||||||
| Compositional bias | 467 – 471 | 5 | Poly-Asn | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Evolutionary analyses of ABC transporters of Dictyostelium discoideum." Anjard C., Loomis W.F. Eukaryot. Cell 1:643-652(2002) [PubMed: 12456012] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], NOMENCLATURE. Strain: AX4. |
| [2] | "The genome of the social amoeba Dictyostelium discoideum." Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. Kuspa A.Nature 435:43-57(2005) [PubMed: 15875012] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4. |
Cross-references
Sequence databases | |
|---|---|
| AF482961 Genomic DNA. Translation: AAL96259.1. AAFI02000003 Genomic DNA. Translation: EAL73166.1. | |
| RefSeq | XP_647545.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1L2T based on UniProtKB Q58206. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 3398219. |
| GenomeReviews | Gene locus abcH2 in contig CM000150_GR. |
| KEGG | ddi:DDB_0191241. |
Organism-specific databases | |
| dictyBase | DDB_G0267428. abcH2. |
Family and domain databases | |
| InterPro | IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR003593. ATPase_AAA+_core. [Graphical view] |
| Pfam | PF00005. ABC_tran. 1 hit. [Graphical view] |
| SMART | SM00382. AAA. 1 hit. [Graphical view] |
| PROSITE | PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ABCH2_DICDI | ||||||||
| Accession | Primary (citable) accession number: Q8T664 Secondary accession number(s): Q55FI8 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
Relevant documents
| Dictyostelium discoideum Dictyostelium discoideum: entries, gene names and cross-references to dictyBase |
| SIMILARITY comments Index of protein domains and families |

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