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Protein
Submitted name:

SD09402p

Gene

CG7879

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: FlyBase

GO - Biological processi

  • regulation of alternative mRNA splicing, via spliceosome Source: FlyBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SD09402pImported
Gene namesi
ORF Names:CG7879Imported
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Organism-specific databases

FlyBaseiFBgn0035235. CG7879.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: FlyBase

PTM / Processingi

Proteomic databases

PaxDbiQ8T3I6.
PeptideAtlasiQ8T3I6.
PRIDEiQ8T3I6.

Expressioni

Gene expression databases

BgeeiFBgn0035235.
ExpressionAtlasiQ8T3I6. differential.

Structurei

3D structure databases

ProteinModelPortaliQ8T3I6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini354 – 425RRM (RNA recognition motif)InterPro annotationAdd BLAST72
Domaini476 – 553RRM (RNA recognition motif)InterPro annotationAdd BLAST78
Domaini699 – 777RRM (RNA recognition motif)InterPro annotationAdd BLAST79

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili549 – 601Sequence analysisAdd BLAST53

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4307. Eukaryota.
ENOG4111WZ9. LUCA.
OrthoDBiEOG091G02B3.

Family and domain databases

InterProiView protein in InterPro
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 2 hits.
SMARTiView protein in SMART
SM00360. RRM. 5 hits.
SUPFAMiSSF54928. SSF54928. 5 hits.
PROSITEiView protein in PROSITE
PS50102. RRM. 3 hits.

Sequencei

Sequence statusi: Complete.

Q8T3I6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVIIRLQNL PWTANARDIR NFFSGLSIPE GGVHIIGGEM GDAFIAFSTD
60 70 80 90 100
EDARCAMLKD REKLMEIQVR LLLSSRAEMQ KVIETARKAA SAQAPVAVPV
110 120 130 140 150
PMPVVVPVTA AKVAGPAAPL PPIIGGLNTF LGQGQVKGVA TGTVPSFLTY
160 170 180 190 200
QQQAGITLSD VTGRRSRSRS SSSDDSDRER ERDRQRERER GRKRRSDRLD
210 220 230 240 250
KSQERELKMV AGGGALPSPW AQPPQNQLPA VGLGLNMGLN LNLPQIPSLQ
260 270 280 290 300
SYTTSTNTTN VTNNYNLEPS ATSVQLLTAL QQVSSGSAAP AQPSKSESEP
310 320 330 340 350
IAFASVNPYA QMYPQLFQQQ QMLLQQQQTQ AKVSPTMGGS PGGGSTPQVV
360 370 380 390 400
ADTCYIRMSG MCQNTSYSDI RKYFQGMYIP HNGIKIMMVN GSRTGVAYVE
410 420 430 440 450
FSRVSSAQKA VQRNNTMFRD RLIQIVPVGD DEFEMAEERA SRQGQDGSRS
460 470 480 490 500
HGNHNGGDRG ERGGGAPVPV PRPVTNVLYI EDLPQTTTEQ DIMKMFSASY
510 520 530 540 550
TVVDILLSPS PKNRRESVAF VLFAREAEAD SALQDTSKHY IGFRQLRVRS
560 570 580 590 600
SSEEDMQNAK EKQRRANEQL LKEEADQREE LLKDQQRRQK QQQENENIQA
610 620 630 640 650
NRFAADPRRR QAEDQQQQQQ MNMGPNFNSN MSPNMMAPFV NGGNMPFHMP
660 670 680 690 700
PLQQNGVNNF PFNMNNNYNY NGNSNGNGPN YPNDNGGAGV IQRPRQEDVF
710 720 730 740 750
VRVHNCEYAT RANDLGELFS LEQLRIEHIE QLFNERNQSS GEFIVEFSDP
760 770 780 790 800
ASCKLAIREF HNRRFRGRGL RVVAITPQEI ADRMKKPFMD YLPGGNGPRK
810 820 830 840 850
AETNNANDGA GGNKASAQPS RRRGPSRFDK PQEQPSQQQD RPLSLEREDN
860 870 880 890 900
SSTSSNAPVK QHFNPFARPD PPLSSSSLSP SNQGQVKPTS PVPVPTSIIP
910 920 930 940 950
DKFNRPGCVV AMRNVPFKAE LKDIMRFFSD YKLSPDDIIR RFNDEGKPTG
960 970 980
DTRVAFESPS EARSAFESRR KKQIFNRTVY LDII
Length:984
Mass (Da):109,418
Last modified:June 1, 2002 - v1
Checksum:i68BF9372DA57B808
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY095099 mRNA. Translation: AAM11427.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ8T3I6_DROME
AccessioniPrimary (citable) accession number: Q8T3I6
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2002
Last sequence update: June 1, 2002
Last modified: July 5, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)